Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0870
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 80 1e-15
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 60 8e-10
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 3.9
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 9.0
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 79.8 bits (188), Expect = 1e-15
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Frame = +2
Query: 2 WDTPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGS-NTQFIELHIFTDASQNAYGACAYI 178
W T + ++ W IK + +++ +PRQ+ + + + + +F+DAS++ Y Y+
Sbjct: 1396 WKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYDYESVNILVFSDASKDIYATTIYL 1454
Query: 179 RTYNLNTEITVRLLCAKSRVAPLK--TISIPRLELCGALLGARLYKKIINSLKLSFTNTC 352
+ + ++LL +K+++ P T++IP++EL +GA L L+L
Sbjct: 1455 QYQYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLAINIGANLAYSTSEQLRLDVAEVI 1514
Query: 353 FWTDSTIVMGWIRMSPHLLKTFVQNRVTELNELTG-------DSVWLHVNSKNNPADLLS 511
F+TDS+ WI +S + +V NRV + ++ S + H +K+NPAD+ +
Sbjct: 1515 FFTDSSCASYWI-LSNKTTRQWVSNRVETIYQVKEKFATDGITSSFRHCPTKDNPADIAT 1573
Query: 512 RG 517
RG
Sbjct: 1574 RG 1575
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 79.8 bits (188), Expect = 1e-15
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Frame = +2
Query: 2 WDTPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGS-NTQFIELHIFTDASQNAYGACAYI 178
W T + ++ W IK + +++ +PRQ+ + + + + +F+DAS++ Y Y+
Sbjct: 1396 WKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYDYESVNILVFSDASKDIYATTIYL 1454
Query: 179 RTYNLNTEITVRLLCAKSRVAPLK--TISIPRLELCGALLGARLYKKIINSLKLSFTNTC 352
+ + ++LL +K+++ P T++IP++EL +GA L L+L
Sbjct: 1455 QYQYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLAINIGANLAYSTSEQLRLDVAEVI 1514
Query: 353 FWTDSTIVMGWIRMSPHLLKTFVQNRVTELNELTG-------DSVWLHVNSKNNPADLLS 511
F+TDS+ WI +S + +V NRV + ++ S + H +K+NPAD+ +
Sbjct: 1515 FFTDSSCASYWI-LSNKTTRQWVSNRVETIYQVKEKFATDGITSSFRHCPTKDNPADIAT 1573
Query: 512 RG 517
RG
Sbjct: 1574 RG 1575
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical protein
K06C4.15 protein.
Length = 1067
Score = 60.5 bits (140), Expect = 8e-10
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Frame = +2
Query: 2 WDTPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGS-NTQFIELHIFTDASQNAYGACAYI 178
W P+ + + W + + +PR++ + I+L IF+DASQ+ Y A AY
Sbjct: 938 WKDPIPKHLLDDWQAIQASFID-RTITVPRRLTTDFEYKEIQLLIFSDASQDIYAAAAYA 996
Query: 179 R-TYNLNTEITVRLLCAKSRVAPLKTIS--IPRLELCGALLGARLYKKIINSLKLSFTNT 349
+Y + + L+ +K+++ P K + IP+LEL G +G+ L I+ L TN
Sbjct: 997 YFSYGDDRPPVISLITSKNKIKPSKETNWTIPKLELLGIEIGSNLASSIVKELSCKVTNI 1056
Query: 350 CFWTDSTIVM 379
+TDS+ +
Sbjct: 1057 RLFTDSSCAL 1066
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 56.0 bits (129), Expect = 2e-08
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Frame = +2
Query: 2 WDTPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGSNTQFIELHIFTDASQNAYGACAYIR 181
WDTP+ ++ + + + ++ R I + + E+ F DASQ A AC Y++
Sbjct: 473 WDTPLKEKHEKEYKSITDNIRGFSK-DFNRHIIDKSGEN-EIIAFADASQEAIAACIYVK 530
Query: 182 TYNLNTEITVRLLCAKSRVAPLK-TISIPRLELCGALLGARLYKKIINSLK---LSFTNT 349
+ V LL KS V LK +IP+LE+ + + +L+ + T
Sbjct: 531 -----NKYGVNLLFGKSNVKSLKEKWTIPKLEVQALKVATDRALSTLTALQDGDIKVTKV 585
Query: 350 CFWTDSTIVMGWIRMSPHLLKT--FVQNRVTEL---NEL---TGDSVWL-HVNSKNNPAD 502
++DS I + W+R P + ++NR+ + NE G V+ +VN+ NPAD
Sbjct: 586 ILFSDSEITLAWLRSEPGKKEVGILIKNRIESIRKTNETMLQKGVQVFFGYVNTLENPAD 645
Query: 503 LLSRG 517
L +RG
Sbjct: 646 LRTRG 650
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 311 KIINSLKLSFTNTCFWTDSTIVMGWIRMSPHLLKTFVQNRVTELNELTGDSVWLHVNS-K 487
KI + +S NTC W S I + +L +F++NR+ + + + + V S +
Sbjct: 654 KIPFDVSMSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKG-CDEPMNVEVKSIQ 712
Query: 488 NNPADLLSRGGARYPIRP 541
N DL+ +G A P +P
Sbjct: 713 NVEPDLIYKGTAFKPEKP 730
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 311 KIINSLKLSFTNTCFWTDSTIVMGWIRMSPHLLKTFVQNRVTELNELTGDSVWLHVNS-K 487
KI + +S NTC W S I + +L +F++NR+ + + + + V S +
Sbjct: 654 KIPFDVSMSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKG-CDEPMNVEVKSIQ 712
Query: 488 NNPADLLSRGGARYPIRP 541
N DL+ +G A P +P
Sbjct: 713 NVEPDLIYKGTAFKPEKP 730
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 SNFIKTLTHLNELRIPRQIRGSNTQFIELHIFTDASQNAYGACAYIRT-YNLNTEITVRL 217
S+++ + H ++ R++RG+ F+E+ ++ +Y + I + + N I V+
Sbjct: 243 SDYVYAIVHSRNEKLERRLRGAIDSFMEIESKIRQARISYVSSFTINSPHTPNVSIIVKF 302
Query: 218 LCAKSRVAPLKT 253
C K + KT
Sbjct: 303 CCLKPCNSDAKT 314
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 65 HLNELRIPRQIRGSNTQFIELHIFTDASQNAYGACAYIRTYNLNTEITVRLLCAK 229
++N R + G T+ + H F D + C Y + + N E+ LCAK
Sbjct: 284 NVNNRRKALIMAGRCTRCLGRHSFKDCRSAKFNVCMYCKDEDPNVELHNYGLCAK 338
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 352 FLDGFDYRNGLDTHVTSFI 408
+++GFDY+N HV SF+
Sbjct: 1002 WIEGFDYQNSRQNHVHSFL 1020
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,792,409
Number of Sequences: 27780
Number of extensions: 251114
Number of successful extensions: 507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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