Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0869
         (629 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    90   4e-17
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    51   3e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    41   0.021
UniRef50_UPI0000660A83 Cluster: family with sequence similarity ...    37   0.46 
UniRef50_Q7PR92 Cluster: ENSANGP00000012174; n=1; Anopheles gamb...    35   1.4  
UniRef50_A5BRH1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_Q1LYR1 Cluster: Novel protein; n=5; Danio rerio|Rep: No...    33   7.5  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 90.2 bits (214), Expect = 4e-17
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +2

Query: 488  QELFEMIPASRFYHRTXRHRSRVHPYYLEPLRSSTVRFQRSF 613
            +ELFEMIPASRFYHRT RHRSRVHPYYLEPLRSSTVRFQRSF
Sbjct: 893  EELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSF 934


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 290 KTSTTHRHSPLCFSPDLLSGSRFRADGRIFEALLFLGLVLANSFRLNP*THLPFRAK 460
           + +T  +  P+ F       SRFR+DGR  EALL LGLVLANS RL+P   LP R +
Sbjct: 65  RRATNPKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSP-YELPNRPR 120


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 41.1 bits (92), Expect = 0.021
 Identities = 23/41 (56%), Positives = 26/41 (63%)
 Frame = +2

Query: 293 TSTTHRHSPLCFSPDLLSGSRFRADGRIFEALLFLGLVLAN 415
           T   HR  PL FSPDLLSGSRFR  G  +E +L LG +  N
Sbjct: 388 TENEHRCCPLSFSPDLLSGSRFRT-GAEYE-MLGLGTIAGN 426


>UniRef50_UPI0000660A83 Cluster: family with sequence similarity 65,
           member A (FAM65A), mRNA; n=1; Takifugu rubripes|Rep:
           family with sequence similarity 65, member A (FAM65A),
           mRNA - Takifugu rubripes
          Length = 1104

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = -1

Query: 596 ALWMTAVAPGSMDELYSGGGRCDGKIEMPVSSRT 495
           AL MT  APGS +E+    G   G IEM +SSRT
Sbjct: 562 ALLMTKAAPGSQEEMSLSSGMSVGDIEMEISSRT 595


>UniRef50_Q7PR92 Cluster: ENSANGP00000012174; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000012174 - Anopheles gambiae
           str. PEST
          Length = 1148

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 188 IISNGKQLA*GELYSSDVNQNTLKHRSPFSSITTKTSTTHR 310
           +I   ++L  G + SS + QNT  HR P ++I T T+TT R
Sbjct: 53  LICPSERLTDGRVESSGIVQNTRNHREPTTTIPTTTTTTAR 93


>UniRef50_A5BRH1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 788

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 28/92 (30%), Positives = 41/92 (44%)
 Frame = +2

Query: 128 CKKNSRRKWPCLNWELGNSCIISNGKQLA*GELYSSDVNQNTLKHRSPFSSITTKTSTTH 307
           CK+ S RK   LNW+  +   +S   Q       S D NQ  L        ++TKT T  
Sbjct: 591 CKQESLRKKVELNWDKMDENDVSMEIQET-----SLDHNQR-LPVSQKIDELSTKTQTLK 644

Query: 308 RHSPLCFSPDLLSGSRFRADGRIFEALLFLGL 403
            H+ LC     ++         +++ALLFLG+
Sbjct: 645 EHTILCNEVKSINADS-SPGPEVYDALLFLGI 675


>UniRef50_Q1LYR1 Cluster: Novel protein; n=5; Danio rerio|Rep: Novel
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 783

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
 Frame = +2

Query: 176 GNSCIISNGKQLA*GELYSSDVNQNTLKHRSPFSSIT-----TKTSTTHRHSPLCFSPDL 340
           G+  I  NG Q+   E Y  D N   L  R+ FS +       ++ T  R SP+   PD 
Sbjct: 576 GDDSITWNGSQITVNESYILDTNSEELNRRNDFSGMAQVVAGCRSQTLRRRSPVQPRPDY 635

Query: 341 LSGSRFRA 364
           L     R+
Sbjct: 636 LQHFTLRS 643


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,051,119
Number of Sequences: 1657284
Number of extensions: 12139112
Number of successful extensions: 32131
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32123
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)