Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0869
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.4  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRCSPRS 65
           WL  + W     WSP C   S
Sbjct: 224 WLLSQAWISVHIWSPNCDKLS 244


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRCSPRS 65
           WL  + W     WSP C   S
Sbjct: 457 WLLSQAWISVHIWSPNCDKLS 477


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRCSPRS 65
           WL  + W     WSP C   S
Sbjct: 457 WLLSQAWISVHIWSPNCDKLS 477


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRC 53
           WL  + W     W+P+C
Sbjct: 470 WLLSQTWITLHIWTPKC 486


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRC 53
           WL  + W     W+P+C
Sbjct: 470 WLLSQTWITLHIWTPKC 486


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRC 53
           WL  + W     W+P+C
Sbjct: 470 WLLSQTWITLHIWTPKC 486


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +3

Query: 3   WLWVRRWARAACWSPRC 53
           WL  + W     W+P+C
Sbjct: 470 WLLSQTWITLHIWTPKC 486


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 579 CGHPQCVSRGLF 614
           CG   C+ RGLF
Sbjct: 124 CGDGNCIERGLF 135


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 405 TSPKKSSASKILPSARNRDPLRRSG 331
           TSP K  ASK  P+A  R     +G
Sbjct: 199 TSPTKVKASKASPAAAPRSVATPTG 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,718
Number of Sequences: 336
Number of extensions: 2930
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)