BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0869 (629 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 5.4 SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33) 27 9.5 >SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) Length = 844 Score = 28.3 bits (60), Expect = 5.4 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -2 Query: 79 GSPTHERGEQRGDQHAARAQRRTQ 8 G+PTH+ E++GDQ+A +T+ Sbjct: 703 GAPTHDDQEEQGDQNAKEQSDKTE 726 >SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33) Length = 418 Score = 27.5 bits (58), Expect = 9.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 Query: 182 CFQVPSLNKAIFFGYFFCRC 123 CFQ P+L A+ F Y C C Sbjct: 176 CFQKPNLKPALLFIYVSCSC 195 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,089,376 Number of Sequences: 59808 Number of extensions: 383593 Number of successful extensions: 1109 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1108 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1572561250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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