Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0865
         (362 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.32 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    20   6.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    20   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   9.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   9.0  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.32
 Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -1

Query: 362 ASNRWSRDRLNTSRN---AVARCSYARSAHKAGNGGTARE 252
           ++N W ++  N +RN   + A+   +R++  +GNGG  ++
Sbjct: 384 SNNHWRKNNPNDNRNNTSSRAQGETSRNSKNSGNGGGVQD 423


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 227  VEAPYKRGTPGQCHRCQLYGHSARNCNARPRCV 325
            V+ P +   PGQ      Y     NCNA  RCV
Sbjct: 1096 VDKPSQPCEPGQ------YVPDPHNCNAYYRCV 1122


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  RHKCAPGTQRARQIRV 134
           R++C+PG    R+ RV
Sbjct: 121 RYQCSPGLAYDREARV 136


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  RHKCAPGTQRARQIRV 134
           R++C+PG    R+ RV
Sbjct: 121 RYQCSPGLAYDREARV 136


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 74   PTRSFLICSTSSFF 33
            P+  FLI  T SFF
Sbjct: 1003 PSAIFLIAMTGSFF 1016


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 74   PTRSFLICSTSSFF 33
            P+  FLI  T SFF
Sbjct: 1003 PSAIFLIAMTGSFF 1016


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 74   PTRSFLICSTSSFF 33
            P+  FLI  T SFF
Sbjct: 1003 PSAIFLIAMTGSFF 1016


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 74   PTRSFLICSTSSFF 33
            P+  FLI  T SFF
Sbjct: 1003 PSAIFLIAMTGSFF 1016


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 146 STMSYANLSRPLCTRCTL 93
           S   +A L  PLC  C L
Sbjct: 201 SKYKHAELVMPLCKSCDL 218


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 32  GTPRTTTRSS 3
           GTPRTT  SS
Sbjct: 291 GTPRTTPASS 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,241
Number of Sequences: 336
Number of extensions: 2012
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)