Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0865
(362 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.010
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 33 0.092
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 32 0.12
SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.16
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 32 0.16
SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 32 0.16
SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046) 32 0.16
SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.16
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 32 0.16
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 32 0.16
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.21
SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.21
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.28
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 31 0.37
SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31) 31 0.37
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024) 31 0.37
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 31 0.37
SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18) 30 0.49
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 30 0.65
SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 0.85
SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 0.85
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.85
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06) 29 0.85
SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022) 29 0.85
SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 0.85
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 29 0.85
SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034) 29 1.1
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_31317| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 2.6
SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018) 28 2.6
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_15789| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05) 27 3.4
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 27 3.4
SB_47175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 27 4.6
SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044) 27 4.6
SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_29912| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00036) 27 4.6
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 27 4.6
SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08) 27 4.6
SB_29775| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_54370| Best HMM Match : BNR (HMM E-Value=1.4) 27 6.0
SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1) 27 6.0
SB_36147| Best HMM Match : Keratin_B2 (HMM E-Value=1.7) 27 6.0
SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 26 8.0
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 26 8.0
SB_32630| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-25) 26 8.0
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.0
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.0
SB_48855| Best HMM Match : Amidohydro_3 (HMM E-Value=0.2) 26 8.0
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 26 8.0
SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074) 26 8.0
SB_2006| Best HMM Match : Aldolase (HMM E-Value=4.7) 26 8.0
SB_2005| Best HMM Match : Amidohydro_3 (HMM E-Value=2.38221e-44) 26 8.0
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 230 EAPYKRGTPGQ-CHRCQLYGHSARNCNARPRCVKCLD-DHATTDC 358
+ P K+ +PG+ C+RC GH AR+C +C KC + H DC
Sbjct: 111 DCPEKKESPGESCYRCGKSGHFARDCTDDTKCYKCGNTGHIRRDC 155
Score = 33.9 bits (74), Expect = 0.040
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNA---RPRCVKCLD-DHATTDC 358
C+RC + GH AR+C+A R C +C + H DC
Sbjct: 56 CYRCNMSGHFARDCDAESSRDVCYRCQETGHFARDC 91
>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 35.9 bits (79), Expect = 0.010
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 161 PHREGKKIASC-----LRTVCGLLGVTVEAPYKRG---TPGQCHRCQLYGHSARNCNARP 316
P +G K A C L C + +T++ +R G C C +GH RNC +
Sbjct: 304 PETKGVKCAYCKGSHHLDNCCEFVKITLDE--RRAFIIAKGLCWGCLTWGHDNRNCKIKK 361
Query: 317 RCVKCLDDHAT 349
C+ C + H T
Sbjct: 362 TCISCRELHPT 372
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 212 LLGVTVEAPYKRGTPGQCHRCQLYGHSARN--CNARPRCVKC 331
+L ++ P K+ + +CHRC GH A + C+ +C KC
Sbjct: 140 ILTFILDNPSKQNSFVRCHRCNKQGHKAADCRCSKNHQCEKC 181
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 32.3 bits (70), Expect = 0.12
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNCNARPRCVKC 331
G P +C C GH C R RC +C
Sbjct: 147 GQPAECGYCHQVGHPISTCPVRGRCFRC 174
>SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKC 230
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 124 GRCHRCNKQGHKAADCRCSKNHQCEKC 150
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 133 GRCHRCNKQGHKAADCRCSKNHQCEKC 159
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 196 GRCHRCNKQGHKAADCRCSQNHQCEKC 222
>SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 382
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 230 GRCHRCNKQGHKAADCRCSKNHQCEKC 256
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKC 230
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 261 GRCHRCNKQGHKAADCRCSQNHQCEKC 287
>SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 403
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 124 GRCHRCNKQGHKAADCRCSQNHQCEKC 150
>SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046)
Length = 338
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 87 GRCHRCNRQGHKAADCRCSKNHQCEKC 113
>SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 438
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 184 GRCHRCNKQGHKAADCRCSKNHQCEKC 210
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 54 GRCHRCNKQGHKAADCRCSKNHQCEKC 80
>SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKC 230
>SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 297
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKC 230
>SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 295
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 202 GRCHRCNKQGHKAADCRCSKNHQCEKC 228
>SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKC 230
>SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKC 230
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 84 GRCHRCNKQGHKAADCRCSKNHQCEKC 110
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 162 GRCHRCNKQGHKAADCRCSQNHQCEKC 188
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ +C KC
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKC 230
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC GH A + C+ C KC
Sbjct: 1021 GRCHRCNKQGHKAADCRCSQNHHCEKC 1047
>SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 203 VCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTD 355
+CG G T QC +C H A+ ++ VKC+DD T +
Sbjct: 108 ICGKCGYKHGKDKCPATGKQCIKCSKMNHFAKMYKSKVTSVKCVDDDTTDE 158
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 206 CGLLG-VTVEAPYKRGTPGQCHRCQLYGHSARNC 304
CG +G E P RG CH+C GH +R C
Sbjct: 385 CGEVGHFARECPTGRGQSDTCHKCGETGHYSREC 418
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +2
Query: 245 RGTPGQCHRCQLYGHSARNC----NARPRCVKCLD-DHATTDC 358
RG+ G CH+C GH AR C C KC + H + +C
Sbjct: 377 RGS-GTCHKCGEVGHFARECPTGRGQSDTCHKCGETGHYSREC 418
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 30.7 bits (66), Expect = 0.37
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C+ C GH A C A C KC H T+ C
Sbjct: 305 CYNCTKGGHMATKCKA-GNCAKCNSRHHTSIC 335
>SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31)
Length = 526
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +2
Query: 200 TVCGLLGVTVEAPYKR-GTPGQCHRCQLYGH----SARNCNARP 316
TV GL A Y GTPGQC++C+ + S +CNA P
Sbjct: 258 TVSGLYQCVCNAGYYGPGTPGQCYKCRKGSYKKFPSPEDCNACP 301
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 260 QCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
+C C GH+ C RC+ C H DC+
Sbjct: 527 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCT 560
>SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
Length = 90
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 260 QCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
+C C GH+ C RC+ C H DC+
Sbjct: 19 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCT 52
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 30.7 bits (66), Expect = 0.37
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C+ C GH A C A C KC H T+ C
Sbjct: 199 CYNCTKGGHMATKCKA-GNCAKCNSRHHTSIC 229
>SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18)
Length = 368
Score = 30.3 bits (65), Expect = 0.49
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 236 PYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTD 355
P+K T +C Q + + CN +PRC +D+ T+
Sbjct: 45 PHKNATNTRCVGKQAFAKIPKKCNGKPRCNVIIDETFFTE 84
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 29.9 bits (64), Expect = 0.65
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 116 GATNSRTTWCS*HSNPHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQ-CHRCQLYGHS 292
G N + C H R+G +A C +T TV K T C+RC H
Sbjct: 93 GPENKKVNRCPYHE---RDGHTLAEC-KTFAAK---TVSERKKWLTDATLCYRCLDPSHF 145
Query: 293 ARNCNARPRCVKCLD 337
AR+C A +C C D
Sbjct: 146 ARDCRAPIQCATCGD 160
>SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 468
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C C GH CN R C KC H T+ C
Sbjct: 112 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 142
>SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 289
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C C GH CN R C KC H T+ C
Sbjct: 175 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 205
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C C GH CN R C KC H T+ C
Sbjct: 337 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 367
>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
Length = 956
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 260 QCHRCQLYGHSARNCNARPRCVKCLDDH 343
QCH CQ GH A C + + V +DDH
Sbjct: 201 QCHNCQKIGHFATVCQSAKQ-VHEVDDH 227
>SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022)
Length = 297
Score = 29.5 bits (63), Expect = 0.85
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +2
Query: 257 GQCHRCQLYGHSARN--CNARPRCVKC 331
G+CHRC H A + C+ +C KC
Sbjct: 204 GRCHRCNKQAHKAADCRCSKNHQCEKC 230
>SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 449
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C C GH CN R C KC H T+ C
Sbjct: 112 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 142
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 29.5 bits (63), Expect = 0.85
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 242 KRGTPGQCHRCQLYGHSARNCNARPR-CVKCLD-DHATTDC 358
K TP CH Q AR C PR C CL H T+C
Sbjct: 870 KNVTPNSCHHSQREADHAREC---PRCCFSCLKRGHPQTEC 907
>SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034)
Length = 193
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +2
Query: 257 GQCHRCQLY--GHSARNCNARPRCVKCLDDHAT 349
G C C L GH + +C P C KC H T
Sbjct: 99 GYCFNCGLEKPGHGSSSCPDLPACTKCPGRHLT 131
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 263 CHRCQLYGHSARNC-NARP---RCVKCLDD-HATTDC 358
CH+C GH AR C NA +C KC + H +C
Sbjct: 466 CHKCNEEGHFARECPNADSGGNKCFKCNESGHFAREC 502
>SB_31317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 227 VEAPYKRGTPGQCHRCQLYGHSARNCNAR 313
VEA RG P HRC + A+ C AR
Sbjct: 628 VEADSSRGRPPSVHRCHIRKGGAQWCKAR 656
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = -1
Query: 203 RCGDMRQFSCPPGVGSSATSTMSYANLSRPLCTRCTLMTG*D*PTRSFLICSTSSFFGTP 24
RC D +CP +ST + + S P T + T PT S T++ T
Sbjct: 405 RCNDQGMITCPDATTKDVSSTETVSVTSAPTATLTSAPTATVTPTASNAFTETTTVTSTT 464
Query: 23 RTT 15
T
Sbjct: 465 TIT 467
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKC 331
C+RC H AR+C A +C C
Sbjct: 3 CYRCHDPSHFARDCRAPIQCATC 25
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 242 KRGTPGQCHRCQLYGHSARN--CNARPR-CVKC 331
++G C+RC + GH +++ C AR R C KC
Sbjct: 1521 EKGKGKHCYRCGMEGHFSKDPECKARGRMCNKC 1553
>SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 195 SAPCAAYWGSP*-RPPTNAGLPGSATVASFMGTPRVTATRD 314
+A AA SP + P++A P SAT A+ G P A +D
Sbjct: 76 AAEAAAVGSSPAAKTPSSASSPSSATAATTAGKPVAAAAKD 116
>SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 27.9 bits (59), Expect = 2.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 242 KRGTPGQCHRCQLYGHSARNC 304
+R +CH C +GH+ R+C
Sbjct: 78 RRNKGPRCHHCHKFGHTKRDC 98
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 2.6
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 98 CTGYTAGATNSRTTWCS*HSNPHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQ 277
C G+ A + N +T C + GK +C G G+ +GTP C RCQ
Sbjct: 332 CYGH-ASSCNPKTGVCV-DCQHNTVGKNCEAC---AVGFYGIAT-----KGTPNDCKRCQ 381
Query: 278 LYGHSARN 301
G S+ N
Sbjct: 382 CPGGSSGN 389
>SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018)
Length = 1066
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 257 GQCHRCQLYGHSARNCNARPRCVKCLDDHAT 349
G C C H AR+C + C C HAT
Sbjct: 598 GICFACLKPRHLARDCKEKRECSICKKRHAT 628
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 67 LVGQ---SYPVISVHRVHSGRDKFAYDMVLVALEPTPGGQENCLMSPHRVRPI 216
++GQ YP + V +V +G K A +V + P ++ L+ HR P+
Sbjct: 933 MIGQRTPEYPKMRVEKVGNGYLKHAAVSTVVKAKHIPSSEQKILVRTHRHEPV 985
>SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVK 328
C +C GH ARNC A PR K
Sbjct: 374 CFKCNQQGHIARNCTA-PREAK 394
>SB_15789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 192 HEAIFLPSRCGFECYEHHVVREFVAPAVYPVHTYDGVGLTYQVIFNLLDVELFWDPAYY 16
HE LP G E + + +++ V P TY+ VG Q ++ +D D AYY
Sbjct: 34 HEPYSLPYYFGNE----RLSKRYISEDVIPAATYNSVGQLLQKEYDGVDCVFSKDMAYY 88
>SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05)
Length = 437
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 242 KRGTPGQCHRCQLYGHSAR--NCNARPR-CVKC 331
++G C+RC + GH ++ C AR R C KC
Sbjct: 180 EKGKGKHCNRCGMEGHFSKEPECKARGRMCNKC 212
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 27.5 bits (58), Expect = 3.4
Identities = 24/88 (27%), Positives = 32/88 (36%)
Frame = +3
Query: 81 LPRHKCAPGTQRARQIRVRHGARSTRTHTGRARKLPHVSAPCAAYWGSP*RPPTNAGLPG 260
LPRH TQR +R A +T A +A AA + T A
Sbjct: 88 LPRHSSQVRTQRLTAPFIRTAATATAAAAATAAASVAATAAAAATAAATATATTTATAAT 147
Query: 261 SATVASFMGTPRVTATRDRVA*SV*TIT 344
+ A+ T TAT A + T+T
Sbjct: 148 ATAAATATATGTTTATATVTATATATVT 175
>SB_47175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1088
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDD 340
C RC H AR+C + +C C D+
Sbjct: 464 CFRCFDPAHVARDCATKIKCSVCADE 489
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 22 RGVPKKLDVEQIKNDLVGQSYPVISVHRVHSGRDKFAYDMV 144
R P L +++I+N +VGQ +HR+ S + KF +D V
Sbjct: 202 RPEPMVLSLDRIRN-VVGQDRFDDYIHRLPSQQQKFCFDAV 241
>SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044)
Length = 1693
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDD 340
C RC H AR+C + +C C D+
Sbjct: 638 CFRCFDPAHVARDCATKIKCSVCADE 663
>SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 27.1 bits (57), Expect = 4.6
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Frame = +2
Query: 26 GSQKSSTSSKLKMTW*VSPTPS*VCTGYTAGATNSRTTWCS*HSNPHREGKK---IASCL 196
G + SS + K K T +P P + G +S TT NP +G I L
Sbjct: 1456 GDRNSSKNGKCKCTHDAAPLPGSCPKAFCRGEGDSSTTAVEMAGNPPGDGGNPVLIWEVL 1515
Query: 197 RTVCG 211
VCG
Sbjct: 1516 HDVCG 1520
>SB_29912| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00036)
Length = 618
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNCNARPRCVKC 331
G P Q C H +C R RC KC
Sbjct: 75 GQPTQFAYCHQMAHLISSCPVRGRCFKC 102
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 90 HKCAPGTQRARQIRVRHGARSTRT 161
H C PGTQR Q G S +T
Sbjct: 378 HYCPPGTQRGNQFPCASGTYSNKT 401
>SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08)
Length = 256
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLD-DHATTDC 358
C C +GH+ R C C KC + H + DC
Sbjct: 109 CMECSDFGHTRRKC-PNIECRKCKERGHISFDC 140
>SB_29775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 227 VEAPYKRGTPGQCHRCQLYGHSARNCNAR 313
VEA R P HRC + SA C AR
Sbjct: 254 VEADPSRRRPPSVHRCHIRKDSAHWCKAR 282
>SB_54370| Best HMM Match : BNR (HMM E-Value=1.4)
Length = 263
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 58 KNDLVGQSYPVISVHRVHSGRDKFAYDMVLV 150
+NDL+ Q S RV G+DKF D+V V
Sbjct: 98 RNDLLHQDIRSNSHVRVADGKDKFYIDIVFV 128
>SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 259
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 227 R*PPIGRTRCGDMRQFSCPPGVGSSATSTMSYANLSRPLCTRCT 96
R PP+ TRC + R+ CPP T +Y P TRCT
Sbjct: 102 RCPPL--TRCTNYRKRRCPP-----LTMCTNYRKRRCPPLTRCT 138
>SB_36147| Best HMM Match : Keratin_B2 (HMM E-Value=1.7)
Length = 533
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 198 RRHEAIFLPSRCGFECYEHHVVREFVAPA 112
R H +F P +C + C HH + +P+
Sbjct: 246 RAHVDVF-PIKCSYRCVPHHALMSMCSPS 273
>SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 257 GQCHRCQLYGHSARNC 304
G+CHRC H A +C
Sbjct: 196 GRCHRCNKQAHKAADC 211
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +2
Query: 257 GQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
G+C C GH + C + C C H + C
Sbjct: 80 GRCFICLKKGHRSNECFNKDGCSDCRGRHHVSIC 113
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 26.2 bits (55), Expect = 8.0
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Frame = +3
Query: 84 PRHKCAPGTQRARQIRVRHGARSTRTHTGR-----ARKLPHVSAPCAAYWGSP*RPPTNA 248
P APG Q R R G + + H G A +P P G+P P NA
Sbjct: 426 PGRDGAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPV-GAP-GPVGNA 483
Query: 249 GLPGS 263
G PGS
Sbjct: 484 GSPGS 488
>SB_32630| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-25)
Length = 474
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 182 FSCPPGVGSSATSTMSY 132
FSC P GS++ ST+SY
Sbjct: 157 FSCAPDWGSASASTLSY 173
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 26.2 bits (55), Expect = 8.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 263 CHRCQLYGHSARNC 304
C++C YGH AR C
Sbjct: 202 CYKCGKYGHFAREC 215
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 242 KRGTPGQCHRCQLYGHSARNCNAR 313
+ G+ +C+ C GH AR+C R
Sbjct: 112 RMGSNEKCYECGRVGHFARDCTRR 135
>SB_48855| Best HMM Match : Amidohydro_3 (HMM E-Value=0.2)
Length = 391
Score = 26.2 bits (55), Expect = 8.0
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 210 PHTVRRHEAIF--LPSRCGFECYEHHVVREFVAPAVYPVHTYDGVGLTYQVIFNLLDVEL 37
PH AIF LPS G+EC+ + V+ + + V L + V F D EL
Sbjct: 70 PHQHAIQAAIFSILPSISGYECFSYAEVKARIMKGISAVDPSQS-PLGWGVTFG-WDPEL 127
Query: 36 FWDPAYYDAEF 4
D DA+F
Sbjct: 128 VRDLPALDAKF 138
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +2
Query: 257 GQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
G+C C GH + C + C C H + C
Sbjct: 356 GRCFICLKKGHRSNECFNKDGCSDCRGRHHVSIC 389
>SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074)
Length = 996
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 206 CGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNC 304
CG G R +CH+C H AR C
Sbjct: 45 CGRCGAKHSTGNCRAYEAECHKCGKRNHYARMC 77
>SB_2006| Best HMM Match : Aldolase (HMM E-Value=4.7)
Length = 186
Score = 26.2 bits (55), Expect = 8.0
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 210 PHTVRRHEAIF--LPSRCGFECYEHHVVREFVAPAVYPVHTYDGVGLTYQVIFNLLDVEL 37
PH AIF LPS G+EC+ + V+ + + V L + V F D EL
Sbjct: 70 PHQHAIQAAIFSILPSISGYECFSYAEVKARIMKGISAVDPSQS-PLGWGVTFG-WDPEL 127
Query: 36 FWDPAYYDAEF 4
D DA+F
Sbjct: 128 VRDLPALDAKF 138
>SB_2005| Best HMM Match : Amidohydro_3 (HMM E-Value=2.38221e-44)
Length = 572
Score = 26.2 bits (55), Expect = 8.0
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 210 PHTVRRHEAIF--LPSRCGFECYEHHVVREFVAPAVYPVHTYDGVGLTYQVIFNLLDVEL 37
PH AIF LPS G+EC+ + V+ + + V L + V F D EL
Sbjct: 70 PHQHAIQAAIFSILPSISGYECFSYAEVKARIMKGISAVDPSQS-PLGWGVTFG-WDPEL 127
Query: 36 FWDPAYYDAEF 4
D DA+F
Sbjct: 128 VRDLPALDAKF 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,205,511
Number of Sequences: 59808
Number of extensions: 311996
Number of successful extensions: 1158
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 570200590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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