Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0865
(362 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 54 6e-08
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 54 6e-08
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 54 6e-08
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 52 3e-07
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 50 9e-07
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 50 9e-07
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 50 9e-07
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 48 3e-06
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 48 4e-06
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 47 6e-06
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 47 6e-06
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 47 9e-06
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 47 9e-06
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 47 9e-06
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 47 9e-06
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 43 1e-04
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 43 1e-04
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 39 0.002
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 36 0.021
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 32 0.26
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 32 0.26
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 32 0.26
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 31 0.60
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 31 0.60
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 31 0.60
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 29 1.4
AE014296-2034|AAF50006.2| 2523|Drosophila melanogaster CG32092-P... 28 3.2
AY071441-1|AAL49063.1| 151|Drosophila melanogaster RE52596p pro... 27 5.6
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 27 5.6
AE014134-841|AAF52201.2| 151|Drosophila melanogaster CG31917-PA... 27 5.6
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 27 7.4
BT010107-1|AAQ22576.1| 1287|Drosophila melanogaster GH05223p pro... 27 7.4
AY128428-1|AAM75021.1| 686|Drosophila melanogaster GH26549p pro... 27 7.4
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 27 7.4
AF529189-1|AAN31661.1| 686|Drosophila melanogaster protein tyro... 27 7.4
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 27 7.4
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 27 7.4
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 27 7.4
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 27 7.4
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 27 7.4
AE014134-188|AAF51427.3| 1144|Drosophila melanogaster CG31795-PA... 27 7.4
AE014134-187|AAF51431.3| 1288|Drosophila melanogaster CG31795-PB... 27 7.4
AY061470-1|AAL29018.1| 574|Drosophila melanogaster LD43674p pro... 27 9.7
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 27 9.7
AE014297-4306|AAF56845.2| 574|Drosophila melanogaster CG1420-PA... 27 9.7
AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA... 27 9.7
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 54.0 bits (124), Expect = 6e-08
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
+TVE P+KR P QC CQ YGH+ C + CV C + H T +C
Sbjct: 370 ITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANC 415
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 54.0 bits (124), Expect = 6e-08
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
+TVE P+KR P QC CQ YGH+ C P CV C D H + C
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQC 71
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 54.0 bits (124), Expect = 6e-08
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
+TVE P+KR P QC CQ YGH+ C + CV C + H T +C
Sbjct: 214 ITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANC 259
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 51.6 bits (118), Expect = 3e-07
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E KR QCHRCQ GH+A+ C CVKC +H DC+
Sbjct: 273 VVIEPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCT 319
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +2
Query: 161 PHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDD 340
P +G + L G V VE P QCHRCQ +GH+ C +C+KC
Sbjct: 761 PKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQL 820
Query: 341 HATTDCS 361
HAT C+
Sbjct: 821 HATVSCT 827
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +2
Query: 161 PHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDD 340
P +G + L G V VE P QCHRCQ +GH+ C +C+KC
Sbjct: 684 PKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQL 743
Query: 341 HATTDCS 361
HAT C+
Sbjct: 744 HATVSCT 750
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +2
Query: 161 PHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDD 340
P +G + L G V VE P QCHRCQ +GH+ C +C+KC
Sbjct: 684 PKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQL 743
Query: 341 HATTDCS 361
HAT C+
Sbjct: 744 HATVSCT 750
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E + P QC+RCQ + H+ +C PRC+KC DH ++ C+
Sbjct: 642 VDIERKNRTREPVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCT 688
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = +2
Query: 161 PHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDD 340
P +G + L G V VE P QCHRCQ +GH+ C +C+KC
Sbjct: 761 PKADGSHLKVLLIKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQL 820
Query: 341 HATTDCS 361
HA+ C+
Sbjct: 821 HASVSCT 827
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 167 REGKKIASCLR-TVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDH 343
++G + L+ T G VTVE +R QC RCQ++GHS C P C KC H
Sbjct: 338 KQGPNVKESLKITRLGRYRVTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPH 397
Query: 344 AT 349
T
Sbjct: 398 MT 399
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 167 REGKKIASCLR-TVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDH 343
++G + L+ T G VTVE +R QC RCQ++GHS C P C KC H
Sbjct: 372 KQGPNVKESLKITRLGRYRVTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPH 431
Query: 344 AT 349
T
Sbjct: 432 MT 433
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 46.8 bits (106), Expect = 9e-06
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E + P QC+RCQ + H+ +C PRC+KC +H ++ C+
Sbjct: 634 VDIERKNRTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT 680
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 46.8 bits (106), Expect = 9e-06
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E + P QC+RCQ + H+ +C PRC+KC +H ++ C+
Sbjct: 612 VDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT 658
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 46.8 bits (106), Expect = 9e-06
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 254 PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
P QCHRCQ +GH+ C +C+KC HAT C+
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCT 37
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 46.8 bits (106), Expect = 9e-06
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E + P QC+RCQ + HS +C PRC+KC H ++ C+
Sbjct: 649 VDIERKNRTREPVQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCT 695
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E + P QC+RCQ + H+ +C PRC+K +H ++ C+
Sbjct: 227 VDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT 273
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 221 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCS 361
V +E + P QC+RCQ + H+ +C PRC+K +H ++ C+
Sbjct: 227 VDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT 273
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 PGQCHRCQLYGHSARNCNARPRCVKC-LDDHATTDCS 361
P +C CQL GH++++C P CV C L H C+
Sbjct: 201 PMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCT 237
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 35.5 bits (78), Expect = 0.021
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 233 APYKRGTPGQ--CHRCQLYGHSARNCNARPRCVKCLDD 340
APY + C RC +GH A+ C A PRC+ C D
Sbjct: 419 APYCKSVDRSDCCLRCGEHGHKAKGCVAPPRCLICSSD 456
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 260 QCHRCQLYGHSARNC-NARPRCVKCLD-DHATTDCS 361
+C++C +GH AR C RC +C H + DC+
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCT 91
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 230 EAPYKRG-TPGQCHRCQLYGHSARNC-NARPRCVKC-LDDHATTDC 358
EA +RG T C++C GH ++NC C C H +C
Sbjct: 113 EAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 260 QCHRCQLYGHSARNC-NARPRCVKCLD-DHATTDCS 361
+C++C +GH AR C RC +C H + DC+
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCT 91
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 230 EAPYKRG-TPGQCHRCQLYGHSARNC-NARPRCVKC-LDDHATTDC 358
EA +RG T C++C GH ++NC C C H +C
Sbjct: 113 EAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 260 QCHRCQLYGHSARNC-NARPRCVKCLD-DHATTDCS 361
+C++C +GH AR C RC +C H + DC+
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCT 91
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 230 EAPYKRG-TPGQCHRCQLYGHSARNC-NARPRCVKC-LDDHATTDC 358
EA +RG T C++C GH ++NC C C H +C
Sbjct: 113 EAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin
alpha1,2 protein.
Length = 3367
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 230 EAPYKRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLDDHATTDC 358
+ PY+ G G+C CQ YGH A +C P C C ++ A +C
Sbjct: 440 DRPYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 230 EAPYKRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLDDHATTDC 358
+ PY+ G G+C CQ YGH A +C P C C ++ A +C
Sbjct: 440 DRPYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 230 EAPYKRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLDDHATTDC 358
+ PY+ G G+C CQ YGH A +C P C C ++ A +C
Sbjct: 440 DRPYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 254 PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTD 355
P +C +C +GH C + C+ C + T D
Sbjct: 185 PLRCKKCLRFGHPTPICKSVETCINCSETKHTND 218
>AE014296-2034|AAF50006.2| 2523|Drosophila melanogaster CG32092-PB
protein.
Length = 2523
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 209 RTRCGDMRQFSCPPGVGSSATSTMSYANLSRPLCTRCTL-MTG*D*PTRSFLI 54
R R CPP +G AT ++S +L + CT+ G D T +F +
Sbjct: 1479 RARYSSSEPTVCPPNIGDQATGSISIQSLLQVPGYHCTIKFVGTDSATLTFKV 1531
>AY071441-1|AAL49063.1| 151|Drosophila melanogaster RE52596p
protein.
Length = 151
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C LY +A C R CV+CL H T C
Sbjct: 117 CGNFSLYSCTA--CGTRYCCVRCLQTHQDTRC 146
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 186 PHVSAPCAAYWGSP*RPPTNAGLPGSATVASFMGTPRVTA 305
P SAP + +G+P P + G P SA +S+ G PR A
Sbjct: 250 PPKSAPPSQSYGAPAPPSSKYGPPKSAPSSSY-GAPRPAA 288
>AE014134-841|AAF52201.2| 151|Drosophila melanogaster CG31917-PA
protein.
Length = 151
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 358
C LY +A C R CV+CL H T C
Sbjct: 117 CGNFSLYSCTA--CGTRYCCVRCLQTHQDTRC 146
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>BT010107-1|AAQ22576.1| 1287|Drosophila melanogaster GH05223p protein.
Length = 1287
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -1
Query: 296 ARSAHKAGNGGTARESRVCRGPLR*PPIGRTRCGDMRQFSCPPGVGSSATSTMSYANLSR 117
AR A KAG GG + G P GR PP SS +ST S++
Sbjct: 865 ARMAGKAGGGGNSTGGAAGGGSNEPAPSGRITSLSKENEGRPP---SSRSSTSSWS--EE 919
Query: 116 PLCTRCTLMTG 84
P T + TG
Sbjct: 920 PALTNMDISTG 930
>AY128428-1|AAM75021.1| 686|Drosophila melanogaster GH26549p
protein.
Length = 686
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -1
Query: 296 ARSAHKAGNGGTARESRVCRGPLR*PPIGRTRCGDMRQFSCPPGVGSSATSTMSYANLSR 117
AR A KAG GG + G P GR PP SS +ST S++
Sbjct: 245 ARMAGKAGGGGNSTGGAAGGGSNEPAPSGRITSLSKENEGRPP---SSRSSTSSWS--EE 299
Query: 116 PLCTRCTLMTG 84
P T + TG
Sbjct: 300 PALTNMDISTG 310
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>AF529189-1|AAN31661.1| 686|Drosophila melanogaster protein
tyrosine phosphatase-likeprotein protein.
Length = 686
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -1
Query: 296 ARSAHKAGNGGTARESRVCRGPLR*PPIGRTRCGDMRQFSCPPGVGSSATSTMSYANLSR 117
AR A KAG GG + G P GR PP SS +ST S++
Sbjct: 245 ARMAGKAGGGGNSTGGAAGGGSNEPAPSGRITSLSKENEGRPP---SSRSSTSSWS--EE 299
Query: 116 PLCTRCTLMTG 84
P T + TG
Sbjct: 300 PALTNMDISTG 310
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 248 GTPGQCHRCQLYGHSARNC 304
G P QC+RC GH ++ C
Sbjct: 165 GDPEQCYRCGRSGHWSKEC 183
>AE014134-188|AAF51427.3| 1144|Drosophila melanogaster CG31795-PA,
isoform A protein.
Length = 1144
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -1
Query: 296 ARSAHKAGNGGTARESRVCRGPLR*PPIGRTRCGDMRQFSCPPGVGSSATSTMSYANLSR 117
AR A KAG GG + G P GR PP SS +ST S++
Sbjct: 703 ARMAGKAGGGGNSTGGAAGGGSNEPAPSGRITSLSKENEGRPP---SSRSSTSSWS--EE 757
Query: 116 PLCTRCTLMTG 84
P T + TG
Sbjct: 758 PALTNMDISTG 768
>AE014134-187|AAF51431.3| 1288|Drosophila melanogaster CG31795-PB,
isoform B protein.
Length = 1288
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -1
Query: 296 ARSAHKAGNGGTARESRVCRGPLR*PPIGRTRCGDMRQFSCPPGVGSSATSTMSYANLSR 117
AR A KAG GG + G P GR PP SS +ST S++
Sbjct: 865 ARMAGKAGGGGNSTGGAAGGGSNEPAPSGRITSLSKENEGRPP---SSRSSTSSWS--EE 919
Query: 116 PLCTRCTLMTG 84
P T + TG
Sbjct: 920 PALTNMDISTG 930
>AY061470-1|AAL29018.1| 574|Drosophila melanogaster LD43674p
protein.
Length = 574
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 152 HSNPHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVK 328
H P E ++ R GL + +++G C C H ++C RPR V+
Sbjct: 84 HQRPQHEDEQGQLDKRAPKGLNTARIITKFRKGA---CENCGAVTHKRKDCLERPRKVQ 139
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +2
Query: 263 CHRCQLYGHSARNCNARPRCVKCLDDHAT 349
C C GH R+C + C C H T
Sbjct: 464 CLNCFARGHQLRDCTSMHSCFTCKGRHHT 492
>AE014297-4306|AAF56845.2| 574|Drosophila melanogaster CG1420-PA
protein.
Length = 574
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 152 HSNPHREGKKIASCLRTVCGLLGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVK 328
H P E ++ R GL + +++G C C H ++C RPR V+
Sbjct: 84 HQRPQHEDEQGQLDKRAPKGLNTARIITKFRKGA---CENCGAVTHKRKDCLERPRKVQ 139
>AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA
protein.
Length = 1316
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 353 RWSRDRLNTSRNAVARCSYARSAHKAGNGG 264
R SR L + ++R SYA S H GNGG
Sbjct: 847 RQSRQSLAAASERMSRASYAGSIH-GGNGG 875
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,968,126
Number of Sequences: 53049
Number of extensions: 450826
Number of successful extensions: 1703
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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