Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0864
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 406 e-114
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 223 2e-59
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 219 3e-58
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 161 1e-40
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 111 8e-26
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 110 2e-25
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 103 3e-23
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 67 3e-12
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 55 1e-08
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 36 0.005
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.043
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.100
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.100
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.17
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.2
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 28 1.6
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 28 1.6
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 27 2.8
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.8
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.8
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 27 3.8
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 5.0
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.0
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 6.6
SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces pombe... 26 6.6
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 26 6.6
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 8.7
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.7
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 25 8.7
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 406 bits (1000), Expect = e-114
Identities = 186/202 (92%), Positives = 195/202 (96%)
Frame = +3
Query: 111 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 290
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 291 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 470
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 471 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 650
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181
Query: 651 GRDLTDYLMKILTERGYSFTTT 716
GRDLTDYLMKIL ERGY+F+TT
Sbjct: 182 GRDLTDYLMKILMERGYTFSTT 203
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 223 bits (546), Expect = 2e-59
Identities = 100/197 (50%), Positives = 142/197 (72%), Gaps = 1/197 (0%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 308
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 309 KYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 485
+ PIE GI+ NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 486 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRDLT 665
N PA+ ++Q VL+LYAS RTTGIVL+ GDG+ H+VPIY+G+++P AI + ++ GRD+T
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191
Query: 666 DYLMKILTERGYSFTTT 716
DYL L + G+ ++
Sbjct: 192 DYLQLQLRKSGHELVSS 208
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 219 bits (536), Expect = 3e-58
Identities = 102/202 (50%), Positives = 143/202 (70%), Gaps = 2/202 (0%)
Frame = +3
Query: 117 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 290
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 291 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 470
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 471 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 650
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV H VP+YE L H + RLD+A
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVA 181
Query: 651 GRDLTDYLMKILTERGYSFTTT 716
GRD T YL+ +L +GY+F T
Sbjct: 182 GRDATRYLISLLLRKGYAFNRT 203
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 161 bits (390), Expect = 1e-40
Identities = 89/221 (40%), Positives = 126/221 (57%), Gaps = 32/221 (14%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 257
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 258 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 416
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 417 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 572
LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 573 GDGVFHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 695
GDGV H +P+ EGY + +I + LAGRD+T ++ +L +R
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 111 bits (268), Expect = 8e-26
Identities = 60/196 (30%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 308
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 309 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 485
+ P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 486 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 659
+N P++ I + S Y + + ++GIVL+ G+ H +P+ G + R+ G
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201
Query: 660 LTDYLMKILTERGYSF 707
+ YL+K+ + SF
Sbjct: 202 SSSYLLKLFQIKYPSF 217
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 110 bits (265), Expect = 2e-25
Identities = 63/196 (32%), Positives = 100/196 (51%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFE+ PA Y+A Q + +ASG+ T ++D G IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 654 RDLTDYLMKILTERGY 701
+ D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 103 bits (247), Expect = 3e-23
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 294 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 467
I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 468 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDL 647
+ FE + PA Y+ QAV +A+ ++T +++D G P+ +G + I + L
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181
Query: 648 AGRDLTDYLMKILTERGYSFTTTRRAGNRS 737
AG L + ++ F R +S
Sbjct: 182 AGDFLNANIEQLFNTMNIEFPPHYRIARKS 211
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 66.9 bits (156), Expect = 3e-12
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Frame = +3
Query: 315 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 482
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 483 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRDL 662
P +A + ++ LYA G G+V+D G PI +G + A +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231
Query: 663 TDYLMKILTE 692
T +L +L E
Sbjct: 232 TQHLQNLLRE 241
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 54.8 bits (126), Expect = 1e-08
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 308
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 309 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 476
++ H G + +W +W N + P ++ +LLT+ + Q++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 477 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVFHTVPIYEGY 614
FE F A A L + G T +V+DSG H +P+ +
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFS 177
Query: 615 ALPHAILRLDLAGRDLTDYLMKILTERGYS 704
A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 178 VQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 36.3 bits (80), Expect = 0.005
Identities = 28/146 (19%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Frame = +3
Query: 306 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKA 449
L YPI+ G+ D D+ +I+ ++ + L++ + + V+ L +
Sbjct: 198 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRV 257
Query: 450 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHA 629
EK+ I+F + + +++ + + +G + V+D G + EG +P++
Sbjct: 258 YVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNS 317
Query: 630 ILRLDLAGRDLTDYLMKILTERGYSF 707
++++ G D+T MK+L + +
Sbjct: 318 RIKINYGGDDITLLFMKLLMRSHFPY 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.043
Identities = 26/76 (34%), Positives = 35/76 (46%)
Frame = +1
Query: 490 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQT 669
++P TSP+ P +R P VP +S P P PS P PS P+ TS
Sbjct: 997 SKPVSTSPAAPLARV--PPVPKLSSKAPPV----PLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 670 TL*RSSPSAATRSLPP 717
+ +SS S A + PP
Sbjct: 1051 PVPKSS-SGAPSAPPP 1065
Score = 29.1 bits (62), Expect = 0.70
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 499 PCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
P T+P P T PV P S P+ P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSS-----TPCPSTKDTHSPTPS 633
PP +P P P VPP S P S P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.100
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 375 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 518
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.9 bits (69), Expect = 0.100
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S ++ P S S C+ T +PP T + P ST T +P P T
Sbjct: 324 STGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS-TSSTG 380
Query: 658 TSQTTL*RSSPSAAT-RSLPP 717
TS + L +S S T S+PP
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPP 401
Score = 30.7 bits (66), Expect = 0.23
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S + P + S C+ T +PP T + P ST T +P P T
Sbjct: 270 STDTNSSPLPTTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS-TSSTG 326
Query: 658 TSQTTL*RSSPSAAT-RSLPP 717
TS + L +S S T S+PP
Sbjct: 327 TSSSPLPSTSTSCTTSTSIPP 347
Score = 30.3 bits (65), Expect = 0.30
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSSTPCPSTKDTHSPTPSCVWT*P 651
C+ ++ PP T S S P VPP S T + T ST SP P+ +
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCT 230
Query: 652 VATSQTTL*RSSPSA-ATRSLPP 717
+TS T SS S T ++PP
Sbjct: 231 TSTSIPTGGSSSLSTPITPTVPP 253
Score = 29.9 bits (64), Expect = 0.40
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 271 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 110
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 29.1 bits (62), Expect = 0.70
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 484 HSTRP--PCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
+ST P P P+ S T P PP S + T SS+P PST + + + S T
Sbjct: 296 NSTTPVTPTVPPTSTSSTSTPP--PPASTSSTGT-SSSPLPSTSTSCTTSTSIPPTGNST 352
Query: 658 TSQT-TL*RSSPSAATRSLPPA 720
T T T+ +S S+ + PPA
Sbjct: 353 TPVTPTVPPTSTSSTSTPPPPA 374
Score = 26.6 bits (56), Expect = 3.8
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWT---PATVSSTPCPSTKDTHSPTPSCVWT 645
C+ ++ PP T S S P VPP S + P +ST T PT S T
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCT 173
Query: 646 *PVATSQTTL*RSSPSAATRSLPP 717
+ T S + T ++PP
Sbjct: 174 TSTSIPPTGGSSSLSTPITPTVPP 197
Score = 26.2 bits (55), Expect = 5.0
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S ST PP S S + + + SC T ++ T +T T + P+ T P+
Sbjct: 365 SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSST-PLT 423
Query: 658 TSQTTL*RSSPSAAT 702
T+ T S P +T
Sbjct: 424 TTNCTTSTSVPYTST 438
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.17
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 174 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 317
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 282 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 193
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 568 TPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSAATRSLPPAEREIVRDI 744
T V S P T + P P+ ++T VAT+ T S+P + +P A VR +
Sbjct: 953 TTLAVGSGTIPGTVEVILPAPTTIYTGTVATTITYSSSSTPVSTVVVIPTAVCSGVRGL 1011
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 502 CTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTT 672
C +PS+ C + PV + T S TP P+T + +PTP+ T T+Q+T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST--TTTAQST 876
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 568 TPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSAATRSLPPA 720
T AT S T P T + P PS +++ VAT+ T S+P++ +P A
Sbjct: 342 TLATASGT-VPGTVEVILPGPSTIYSGTVATTITYDVSSTPASTVVVIPTA 391
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 2.8
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -1
Query: 311 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 132
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 274 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 158
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 574 ATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSAATRS 708
+T SST PS+ T S + S + P+++S T+ SS S++ S
Sbjct: 141 STSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSS 185
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTP-----CPSTKDTHSPTPSCVW 642
S+ S+ P +S S P + VP + T +TVSSTP ++ +PTP VW
Sbjct: 128 SQSSSSPATSSFSDP--KAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVW 185
Query: 643 T*PVATS 663
+ +S
Sbjct: 186 APTIVSS 192
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 520 PCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSP 624
PC+ + PPV+C TP C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 417 LLTEAPLNPKANREKMTQIMFETFN 491
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 311 FEGQDTSFALCLISYIRVLLSHTDHHA 231
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 688 PSAATRSLPPAEREIVRDI 744
PS+AT SLPP +R +R I
Sbjct: 214 PSSATYSLPPYQRPFLRGI 232
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 517 KPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*P-VATSQT 669
KP S+ TRP +P +T T S P P + + ++ P V++SQ+
Sbjct: 65 KPSSKATRPYIP---SYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQS 113
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 529 RCTRPVVPPVSCWTPATVSS-TPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSA 696
R P P V + A S TP P K+T +P+ S P ATS T R P+A
Sbjct: 500 RVAVPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATS--TANRRHPTA 554
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 431 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 580
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 487 STRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
S+RPP S S P T P+ PPV S+TP S D + P
Sbjct: 170 SSRPPVLSNGSFPRQTNTAPLNPPVHLKDNIRNSATPSTSQADIPTQYP 218
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,315,924
Number of Sequences: 5004
Number of extensions: 75435
Number of successful extensions: 276
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -