Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0864
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 406 e-113
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 405 e-113
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 405 e-113
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 401 e-112
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 401 e-112
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 400 e-112
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 396 e-110
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 396 e-110
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 396 e-110
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 369 e-102
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 309 2e-84
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 269 2e-72
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 221 5e-58
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 160 8e-40
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 158 3e-39
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 104 5e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 7e-23
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 103 1e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 100 1e-21
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 50 2e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 50 2e-06
At5g38560.1 68418.m04662 protein kinase family protein contains ... 37 0.016
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 37 0.016
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 37 0.016
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 36 0.022
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 35 0.050
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 35 0.066
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 35 0.066
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 35 0.066
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 35 0.066
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 34 0.087
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 34 0.12
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 34 0.12
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 34 0.12
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 34 0.12
At2g40070.1 68415.m04923 expressed protein 33 0.15
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 33 0.20
At5g43500.2 68418.m05318 expressed protein 33 0.27
At5g43500.1 68418.m05319 expressed protein 33 0.27
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 32 0.35
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 32 0.35
At1g32190.1 68414.m03959 expressed protein 32 0.46
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 32 0.46
At3g24550.1 68416.m03083 protein kinase family protein contains ... 31 0.61
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 31 0.61
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.81
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 1.1
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 30 1.4
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 30 1.9
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 30 1.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.9
At3g51290.1 68416.m05614 proline-rich family protein 30 1.9
At1g10620.1 68414.m01204 protein kinase family protein contains ... 30 1.9
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 29 2.5
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 29 2.5
At3g28790.1 68416.m03593 expressed protein 29 2.5
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 3.3
At2g39950.1 68415.m04909 expressed protein 29 3.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 3.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.3
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 3.3
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 29 3.3
At5g26070.1 68418.m03102 hydroxyproline-rich glycoprotein family... 29 4.3
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 4.3
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 4.3
At3g09000.1 68416.m01053 proline-rich family protein 29 4.3
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 4.3
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 4.3
At5g29020.1 68418.m03592 hypothetical protein 28 5.7
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 5.7
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 5.7
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 5.7
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 28 5.7
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 5.7
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 7.6
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 7.6
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 28 7.6
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 28 7.6
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 28 7.6
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 7.6
At5g13260.1 68418.m01523 expressed protein 27 10.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 10.0
At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels ... 27 10.0
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 27 10.0
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 27 10.0
At3g05750.1 68416.m00646 expressed protein 27 10.0
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 27 10.0
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 27 10.0
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 10.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 406 bits (999), Expect = e-113
Identities = 189/201 (94%), Positives = 195/201 (97%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTDYLMKILTERGYSFTT+
Sbjct: 185 RDLTDYLMKILTERGYSFTTS 205
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 405 bits (997), Expect = e-113
Identities = 189/201 (94%), Positives = 194/201 (96%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTD+LMKILTERGYSFTTT
Sbjct: 185 RDLTDHLMKILTERGYSFTTT 205
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 405 bits (997), Expect = e-113
Identities = 189/201 (94%), Positives = 194/201 (96%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTD+LMKILTERGYSFTTT
Sbjct: 185 RDLTDHLMKILTERGYSFTTT 205
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 401 bits (987), Expect = e-112
Identities = 187/201 (93%), Positives = 192/201 (95%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTD LMKILTERGYSFTTT
Sbjct: 185 RDLTDALMKILTERGYSFTTT 205
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 401 bits (987), Expect = e-112
Identities = 187/201 (93%), Positives = 192/201 (95%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTD LMKILTERGYSFTTT
Sbjct: 185 RDLTDALMKILTERGYSFTTT 205
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 400 bits (984), Expect = e-112
Identities = 187/201 (93%), Positives = 192/201 (95%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTD LMKILTERGY FTTT
Sbjct: 185 RDLTDSLMKILTERGYMFTTT 205
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 396 bits (974), Expect = e-110
Identities = 180/201 (89%), Positives = 193/201 (96%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTDYLMKILTERGY FTTT
Sbjct: 185 RDLTDYLMKILTERGYMFTTT 205
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 396 bits (974), Expect = e-110
Identities = 180/201 (89%), Positives = 193/201 (96%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTDYLMKILTERGY FTTT
Sbjct: 185 RDLTDYLMKILTERGYMFTTT 205
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 396 bits (974), Expect = e-110
Identities = 180/201 (89%), Positives = 193/201 (96%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLTDYLMKILTERGY FTTT
Sbjct: 185 RDLTDYLMKILTERGYMFTTT 205
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 369 bits (907), Expect = e-102
Identities = 164/201 (81%), Positives = 188/201 (93%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 293
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 294 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 473
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 474 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 653
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAG
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 185
Query: 654 RDLTDYLMKILTERGYSFTTT 716
RDLT+YL KI+ ERGY++TT+
Sbjct: 186 RDLTEYLTKIMMERGYTYTTS 206
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 309 bits (758), Expect = 2e-84
Identities = 140/196 (71%), Positives = 166/196 (84%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 308
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 309 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 488
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 489 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRDLTD 668
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ V HTVP+YEGYALPH ILRLDL GRDLTD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTD 178
Query: 669 YLMKILTERGYSFTTT 716
YL++I+TERGY++TT+
Sbjct: 179 YLIEIMTERGYTYTTS 194
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 269 bits (659), Expect = 2e-72
Identities = 121/156 (77%), Positives = 141/156 (90%)
Frame = +3
Query: 237 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 416
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 417 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTV 596
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGV + V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 597 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 704
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY+
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYT 156
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 221 bits (539), Expect = 5e-58
Identities = 97/198 (48%), Positives = 136/198 (68%), Gaps = 2/198 (1%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 302
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 303 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 482
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 483 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRDL 662
+N +++ IQAVL+LYA G TG+V+DSGDGV H VP+ +GY+ PH R+++AGR +
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186
Query: 663 TDYLMKILTERGYSFTTT 716
T YL+ +L+ RGY+ T
Sbjct: 187 TAYLVDLLSRRGYAMNKT 204
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 160 bits (389), Expect = 8e-40
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 22/217 (10%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 263
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 264 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 407
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 408 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVF 587
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGST 184
Query: 588 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 698
P+++GY L A++ L G LTD L+K L +G
Sbjct: 185 TISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 158 bits (384), Expect = 3e-39
Identities = 89/217 (41%), Positives = 127/217 (58%), Gaps = 26/217 (11%)
Frame = +3
Query: 126 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 251
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 252 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 422
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 423 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVF 587
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
Query: 588 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 698
H VP+ EGY + I + +AG+D+T ++ +++ ERG
Sbjct: 185 HVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 104 bits (250), Expect = 5e-23
Identities = 71/182 (39%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Frame = +3
Query: 126 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 302
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 303 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 479
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 480 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 659
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTE 172
Query: 660 LT 665
LT
Sbjct: 173 LT 174
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 7e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 248
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 249 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 425
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 426 EAPLNPKANREK 461
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 103 bits (248), Expect = 1e-22
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 308
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 309 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 488
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 489 NTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVFHTVPIYEGYALPHAILR 638
++Y+A Q+++ LY + R +V+D G H VP+ + L HAI R
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKR 181
Query: 639 LDLAGRDLTDYLMKILTER 695
+DL G+ T+YL ++++ R
Sbjct: 182 IDLGGKAFTNYLKELVSYR 200
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 100 bits (239), Expect = 1e-21
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 308
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 309 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 470
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 471 IMFETFNTPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAIL 635
++FET+ PA+ + A S L+ + GIVL G H++P +G +
Sbjct: 138 LLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSS 197
Query: 636 RLDLAGRDLTDYLMKILTERGYSFTTTR 719
R ++ G +TDYL ++L+ + Y F ++R
Sbjct: 198 RTNIGGYHVTDYLKQLLSLK-YPFHSSR 224
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +3
Query: 372 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 521
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 522 VLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 698
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 699 YSF 707
SF
Sbjct: 301 ISF 303
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +3
Query: 372 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 521
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 522 VLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 698
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 699 YSF 707
SF
Sbjct: 301 ISF 303
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/78 (37%), Positives = 34/78 (43%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQ 666
S+ PP S P + P PPV P TV+S+P P SP PS T P A Q
Sbjct: 53 SSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVV-IASPPPSTPATTPPAPPQ 111
Query: 667 TTL*RSSPSAATRSLPPA 720
T P A+ PPA
Sbjct: 112 TVSPPPPPDASPS--PPA 127
Score = 34.3 bits (75), Expect = 0.087
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL 675
PP SPS P T P P +P+ TP P + P PS P + TT
Sbjct: 118 PPDASPSPPAPTTTNPPPKP----SPSPPGETPSPPGETPSPPKPS-----PSTPTPTTT 168
Query: 676 *RSSPSAATRSLPPA 720
P AT + PP+
Sbjct: 169 TSPPPPPATSASPPS 183
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/77 (31%), Positives = 31/77 (40%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQ 666
S+ PP +SP T P S P V ++P PST T P P + P
Sbjct: 62 SSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAPPQTVSPPPPPDA 121
Query: 667 TTL*RSSPSAATRSLPP 717
+ SP A T + PP
Sbjct: 122 S----PSPPAPTTTNPP 134
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 481 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 627
K S PP +PS P P P S TP T +S P P P+
Sbjct: 136 KPSPSPPGETPSPP-GETPSPPKPSPSTPTPTTTTSPPPPPATSASPPS 183
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 487 STRPPCTSPSKPCSR-CTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
S PP S P S T P PP + P ++P P T +P P
Sbjct: 87 SPPPPVVIASPPPSTPATTPPAPPQTVSPPPPPDASPSPPAPTTTNPPP 135
Score = 27.5 bits (58), Expect = 10.0
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPP--VSCWTPATVSSTPCPSTKDTHSPTPSCVWT*P--V 654
S PP T P P P PP VS P V S+P PS+ + P+P + + P V
Sbjct: 33 SAPPPVTPPPSP------PQSPPPVVSSSPPPPVVSSPPPSS--SPPPSPPVITSPPPTV 84
Query: 655 ATS--QTTL*RSSPSAATRSLPPAEREIV 735
A+S + S P + + PPA + V
Sbjct: 85 ASSPPPPVVIASPPPSTPATTPPAPPQTV 113
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 36.7 bits (81), Expect = 0.016
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Frame = +1
Query: 484 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSP---T 627
H T P T PS C S + P PP TP+T S TP P T +H+P T
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTPHT 102
Query: 628 PSCVWT*PVATSQTTL*RSSPSAATRSLPPA 720
P C P + T S+PS T S PP+
Sbjct: 103 PPCNCGSPPSHPSTPSHPSTPSHPTPSHPPS 133
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 36.7 bits (81), Expect = 0.016
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Frame = +1
Query: 484 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSP---T 627
H T P T PS C S + P PP TP+T S TP P T +H+P T
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTPHT 102
Query: 628 PSCVWT*PVATSQTTL*RSSPSAATRSLPPA 720
P C P + T S+PS T S PP+
Sbjct: 103 PPCNCGSPPSHPSTPSHPSTPSHPTPSHPPS 133
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVAT 660
+T PP T+ + P + P PPVS P TP P+ T P P AT
Sbjct: 36 TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPAT 95
Query: 661 SQTTL*RSSPSAATRSLPP 717
+S P++A PP
Sbjct: 96 PPPQPPQSPPASAPTVSPP 114
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 35.1 bits (77), Expect = 0.050
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +1
Query: 508 SPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSS 687
SPS P S + P P TP+T SS P P + + S PS + P + S T +
Sbjct: 124 SPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSL---PPSASPPT--NGT 178
Query: 688 PSAATRSLPPA 720
P + T + PPA
Sbjct: 179 PDSETLTPPPA 189
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 580 VSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSAATRSLPPA 720
+++ P PST + TPS + P S + S PS + SLPP+
Sbjct: 119 LAAAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 34.7 bits (76), Expect = 0.066
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*P 651
C+ S+ PP S C R TR PVV P TP+ S P PS SP+P P
Sbjct: 384 CAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSI----SPSPPITVPSP 439
Query: 652 VATSQTTL*RSSPSAATRSLPPA 720
T S PS + PP+
Sbjct: 440 PTTPSPG--GSPPSPSIVPSPPS 460
Score = 34.3 bits (75), Expect = 0.087
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQ 666
S PP T PS P + PP P+ S+TP P + T TP+ + P + +
Sbjct: 429 SPSPPITVPSPPTTPSPGGS-PPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPTT 487
Query: 667 TTL*RSSPSAATRSLP 714
T S PS+ T P
Sbjct: 488 PTPGGSPPSSPTTPTP 503
Score = 33.9 bits (74), Expect = 0.12
Identities = 30/79 (37%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW--T*PVAT 660
S PP T PS P S T P PP S +P S P P T T PTP + P+
Sbjct: 526 SPSPPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST-PPTPISPGQNSPPIIP 582
Query: 661 SQTTL*RSSPSAATRSLPP 717
S S PS+ + LPP
Sbjct: 583 SPPFTGPSPPSSPSPPLPP 601
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
S +T P SP P + P+ P TP + S P PS+ SP PS
Sbjct: 509 SSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPS 560
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S +T P SP P + P+ P TP+ S P PS + T + P +
Sbjct: 412 SPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPSPGSPPTS 471
Query: 658 TSQTTL*RSSPSAATRSLP 714
+ T S PS+ T P
Sbjct: 472 PTTPTPGGSPPSSPTTPTP 490
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/79 (32%), Positives = 33/79 (41%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S +T P SP + T PP S TP+ S P PS SP+P P +
Sbjct: 483 SSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSI----SPSPPITVPSPPS 538
Query: 658 TSQTTL*RSSPSAATRSLP 714
T + SPS+ T S P
Sbjct: 539 TPTSPGSPPSPSSPTPSSP 557
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSP-TPSCVWT*PV 654
S +T P SP P + P P S +P T +TP P SP TP+ + P
Sbjct: 438 SPPTTPSPGGSPPSPSIVPSPPSTTP-SPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPS 496
Query: 655 ATSQTTL*RSSPSAATRSLP 714
+ + T S PS+ T P
Sbjct: 497 SPTTPTPGGSPPSSPTTPSP 516
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 34.7 bits (76), Expect = 0.066
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 506 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPAFGLSRSRPHRLPYEDP 685
RR PSR+L+ R RSY R R+ +RRR R+ R R+P R R+R +D
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRARDRSPVLDDE 176
Query: 686 HRARLLVHYHPPSGK 730
+++ PPS K
Sbjct: 177 GSPKIIDGSPPPSPK 191
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 34.7 bits (76), Expect = 0.066
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 506 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPAFGLSRSRPHRLPYEDP 685
RR PSR+L+ R RSY R R+ +RRR R+ R R+P R R+R +D
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRARDRSPVLDDE 187
Query: 686 HRARLLVHYHPPSGK 730
+++ PPS K
Sbjct: 188 GSPKIIDGSPPPSPK 202
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 34.7 bits (76), Expect = 0.066
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 506 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPAFGLSRSRPHRLPYEDP 685
RR PSR+L+ R RSY R R+ +RRR R+ R R+P R R+R +D
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRARDRSPVLDDE 217
Query: 686 HRARLLVHYHPPSGK 730
+++ PPS K
Sbjct: 218 GSPKIIDGSPPPSPK 232
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 34.3 bits (75), Expect = 0.087
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 547 VPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVAT-SQTTL*RSSPSAA-TRSLPPA 720
+PPV+ TP+ ++S P P + T +PT S T PVA+ QT PSA T + PA
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTSPT-TSPVASPPQTDAPAPGPSAGLTPTSSPA 96
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 250 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 113
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW-T*PVATS 663
S PP +PS P T PV PP TP+ S TP P + +PTPS T PV+
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPVSPP 154
Query: 664 QTTL*RSSPS 693
T S PS
Sbjct: 155 PPTPTPSVPS 164
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
S PP +PS P T PV PP TP+ S TP T SP P
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/81 (33%), Positives = 31/81 (38%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQ 666
S PP +PS P P P S +P V TP P T SP P T P S
Sbjct: 182 SPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDV--TPTPPTPSVPSP-PDVTPTPPTPPSV 238
Query: 667 TTL*RSSPSAATRSLPPAERE 729
T PS + +PP E
Sbjct: 239 PT-----PSGSPPYVPPPSDE 254
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/88 (27%), Positives = 27/88 (30%)
Frame = +1
Query: 370 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 549
+PS VSPP T + S T P P P P
Sbjct: 90 VPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPT- 148
Query: 550 PPVSCWTPATVSSTPCPSTKDTHSPTPS 633
PPVS P S P P+ P PS
Sbjct: 149 PPVSPPPPTPTPSVPSPTPPVPTDPMPS 176
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 440 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 619
P + ED +V + Q+ +RR SRA A V + + R+ + H HL +R
Sbjct: 128 PLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRR 187
Query: 620 P 622
P
Sbjct: 188 P 188
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSS------TPCPSTK-DTHSPTPSCVWT 645
+T PP SP P + PPV+ PA ++S P P+TK D+ SP+PS +
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSS--S 142
Query: 646 *PVATSQTTL*RSSPSAATRSLPPA 720
P+ +S +P +T S+ PA
Sbjct: 143 PPLPSS------DAPGPSTDSISPA 161
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = +1
Query: 490 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATS 663
T PP +P+ P P PPVS P T S P + +P P P +
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPP 83
Query: 664 QTTL*R-SSPSAATRSLPPA 720
T +SP S PPA
Sbjct: 84 PATPPPVASPPPPVASPPPA 103
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQ 666
S PP T+ P + P PP +P S P P+T + P V + P AT
Sbjct: 49 SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPAS--PPPATPPPVASPPPPVASPPPATPP 106
Query: 667 TTL*RSSPSAATRSLPPAE 723
++P A + PPA+
Sbjct: 107 PV---ATPPPAPLASPPAQ 122
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSS------TPCPSTK-DTHSPTPSCVWT 645
+T PP SP P + PPV+ PA ++S P P+TK D+ SP+PS +
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSS--S 142
Query: 646 *PVATSQTTL*RSSPSAATRSLPPA 720
P+ +S +P +T S+ PA
Sbjct: 143 PPLPSS------DAPGPSTDSISPA 161
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = +1
Query: 490 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATS 663
T PP +P+ P P PPVS P T S P + +P P P +
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPP 83
Query: 664 QTTL*R-SSPSAATRSLPPA 720
T +SP S PPA
Sbjct: 84 PATPPPVASPPPPVASPPPA 103
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQ 666
S PP T+ P + P PP +P S P P+T + P V + P AT
Sbjct: 49 SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPAS--PPPATPPPVASPPPPVASPPPATPP 106
Query: 667 TTL*RSSPSAATRSLPPAE 723
++P A + PPA+
Sbjct: 107 PV---ATPPPAPLASPPAQ 122
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S T P PSK SR + P P++ + AT ++ P S SP P+ P
Sbjct: 295 SSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSPAPAKPM--PTP 352
Query: 658 TSQTTL*R-SSPSAATRSLPPAE 723
+ L R +SP+ +R P++
Sbjct: 353 SKNPALSRAASPTVRSRPWKPSD 375
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +1
Query: 496 PPC-----TSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDT-HSPTPSC 636
PPC T + C R + P PP+SC TP PCP + HS T C
Sbjct: 626 PPCLEMIFTDLTCACGRTSIP--PPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/92 (21%), Positives = 45/92 (48%)
Frame = +3
Query: 408 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVF 587
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 588 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 683
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/92 (21%), Positives = 45/92 (48%)
Frame = +3
Query: 408 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVF 587
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 588 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 683
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL 675
PP +P P T PV+ P + P TP P +PTP V T P T T +
Sbjct: 192 PPVVTPPTP----TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV-TPPTPTPPTPI 246
Query: 676 *RSSP 690
+ P
Sbjct: 247 PETCP 251
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +1
Query: 493 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVAT 660
+PP T P T PVV P + P TP P +PTP + T P T
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI-TPPTPT 211
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 487 STRPPCTSPSKPCSR-CTRPVVPPVSCWTPATVS-STPCPSTKDTHSPTPSCVWT*PVAT 660
+T+PP ++P P + P PP TP V+ TP P +PTP V T P T
Sbjct: 143 TTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVV-TPPTPT 201
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVAT 660
PP +P P T PV+ P + P TP P +PTP + T P T
Sbjct: 172 PPVVTPPTP----TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI-TPPTPT 221
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVAT 660
PP +P P T PVV P + P TP P +PTP V T P T
Sbjct: 182 PPVITPPTP----TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV-TPPTPT 231
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 481 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVAT 660
K T+PP ++P P ++ PP S P P P T +PTP V T P T
Sbjct: 129 KPPTKPPPSTPKPPTTK------PPPSTPKPPHHKPPPTPCPPPTPTPTPPVV-TPPTPT 181
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 478 SKHSTRPPCTSPS-KPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PV 654
S S P +SPS P + P P S +P S+P P + SP P + P+
Sbjct: 23 SSSSLSPSSSSPSLSPSPPSSSPSSAPPSSLSP----SSPPPLSLSPSSPPPPPPSSSPL 78
Query: 655 ATSQTTL*RSSPSAATRSLPPA 720
++ +L S PS++ S PP+
Sbjct: 79 SSLSPSLSPSPPSSSPSSAPPS 100
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTPATVSSTPC 597
C K S C P+ CS C +P P SCW T C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKCPDTEC 384
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 499 PCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSP 624
PC SP KP + +PV P PA + TP PS K SP
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPSP 137
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 499 PCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
P PS P +PV PP TP P P + +P P+
Sbjct: 48 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPA 92
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSS-TPCPSTKDTHSPTPSCV 639
PP P P +P PP P PCPS +PTP V
Sbjct: 64 PPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 31.5 bits (68), Expect = 0.61
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Frame = +1
Query: 490 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSST--PCPSTKDTHSP-----TPSCVWT* 648
T P + PS P + T P S P T S+ P PST T P PS
Sbjct: 9 TTPSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPS 68
Query: 649 PVATSQTTL*RSSPSAATRSLPPA 720
P + L + SPSA PP+
Sbjct: 69 PPGSLTPPLPQPSPSAPITPSPPS 92
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 627
S +ST PP PS P P PP S P S P T SPT
Sbjct: 48 STNSTSPP---PSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPT 94
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 493 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW 642
+PP P P + T P P PA V P P + +P P +W
Sbjct: 79 KPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 428 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 556
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
HS PP SP P + P PPV P V+ P ++ ++PTPS
Sbjct: 793 HSPPPPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/79 (34%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Frame = +1
Query: 493 RPPCTSPSKPCSRCTRPVVPPV-SCWTPATVSSTPCP---STKDTHSPTPSCVWT*PVAT 660
RP SPS ++ T P PPV S P V S P P HSP P P
Sbjct: 623 RPQPPSPSTEETKTTSPQSPPVHSPPPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVH 682
Query: 661 SQTTL*RSSPSAATRSLPP 717
S SP S PP
Sbjct: 683 SPPPPPVHSPPPPVHSPPP 701
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*P 651
C ++ PP PS P CT P PP S P S P P P P+ V+T P
Sbjct: 44 CLQNQPPPP---PSPPPPSCT-PSPPPPSPPPPKKSSCPPSPLPPPPPPPPPNYVFTYP 98
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +1
Query: 478 SKHSTRP--PCTSPSKP---CSRCTRPV-VPPVSCWTPATVSSTPCPSTKDTHSPTPSCV 639
+K T P P TSP+K S T P P S +P +P P ++ + PTP
Sbjct: 29 TKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVSESSPPPTPVPE 88
Query: 640 WT*PVATSQTTL*RSSP--SAATRSLPPA 720
+ PV + SSP A PPA
Sbjct: 89 SSPPVPAPMVSSPVSSPPVPAPVADSPPA 117
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVS-STPCPSTKDTHSPTPSCVWT*PV 654
PP +P P +P PPV P T + PCP T P P T P+
Sbjct: 130 PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPPKPETCPI 183
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 627
C +RPP S C R P P V+ P ++ S P P+ + PT
Sbjct: 372 CKAFLSRPPVNCGSFSCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFSTPPT 422
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCV 639
HS+ PP SP P S P+ P +S P T S+P P+ + P P C+
Sbjct: 567 HSSPPP-HSPPPPHSP-PPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCI 616
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
+S+ PP SP+ CTRP PP P S P P SP P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP-PEPYYYSSPPP 565
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVS------CWTPATVSST-PCPSTKDTHSPTPSCVW 642
PP SPS P RP PP+S WT T SS P P P PS W
Sbjct: 68 PP--SPSPPPPPPPRPPPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTW 121
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTP---ATVSSTPCPSTKDTHSPTPS 633
+T+PP TSP P S T+ PP + P ++TP P+ SP PS
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPS--SPPPS 89
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWT--PATVSSTPCPST 606
CS PP P + T+PV PPV S +T P+T TP P +
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPVFSAFTTEPSTAPFTPPPES 161
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 610 PS*MGTVWKTPSPESSTIPVVRPDAYSESTAWMATY-MAGVLNVSNMIWVIFSLLALGLR 434
PS + V K+PS S +PVV S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 433 GASVSRT---GCSSGAT 392
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-STPCPSTKDTHSPTPS 633
S +T T S S P P S TP+T + STP PST +PTPS
Sbjct: 258 SSGNTYKDTTGSSSGASPSGSPTPTP-STPTPSTPTPSTPTPSTPTPSTPTPS 309
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 541 PVVPPVSCWTPATVS-STPCPSTKDTHSPTPS 633
P P S TP+T + STP PST +P PS
Sbjct: 283 PSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPS 314
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +1
Query: 499 PCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
P SP P S P PP S TP S P P + SPTP
Sbjct: 217 PLPSPG-PDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At2g39950.1 68415.m04909 expressed protein
Length = 636
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSP 624
ST T P + PV P CW P T SS PS P
Sbjct: 404 STPSTMTGPPPFPLKMGPPVFSPYYCWCPPTTSSLHAPSASYQFPP 449
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVA 657
S +T PP +S P R T P PP S +P+ V + P P + P+P P +
Sbjct: 466 SFRATPPPPSSKMSPSFRATPP--PPSSKMSPS-VKAYPPPPPPPEYEPSPP-----PPS 517
Query: 658 TSQTTL*RSSPSAATRSLPP 717
+ + R+ P S PP
Sbjct: 518 SEMSPSVRAYPPPPPLSPPP 537
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTK 609
PP +S P R T P PP S +P+ ++ P PS+K
Sbjct: 442 PPPSSKMSPTFRATPP--PPSSKMSPSFRATPPPPSSK 477
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 273 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 452
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 453 REK 461
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 273 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 452
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 453 REK 461
REK
Sbjct: 225 REK 227
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*P 651
+S PP +S P R P PP S +P+ + P P + SP P V++ P
Sbjct: 422 YSPPPPPSSKMSPSVRAYSPPPPPYSKMSPSVRAYPPPP--PPSPSPPPPYVYSSP 475
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*P 651
+S PP S P R P PP P V S+P P + P P V++ P
Sbjct: 439 YSPPPPPYSKMSPSVRAYPPPPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSP 494
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 487 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 627
S PP +S P R P PP S +P+ + +P P SP+
Sbjct: 406 SPPPPPSSKMSPTVRAYSPPPPPSSKMSPSVRAYSPPPPPYSKMSPS 452
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 487 STRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSSTP 594
+T PP T +P+ P + T P+VPPV+ P T++ P
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPP 81
>At5g26070.1 68418.m03102 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; similar to root nodule extensin
[Pisum sativum] gi|15021750|gb|AAK77902; Common family
members: At5g19800, At5g57070, At1g72790 [Arabidopsis
thaliana]
Length = 102
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 587 PHRAHLRRIRTPPRHPAFGLSRSRPHRL--PYEDPHRARLLVHYH--PPSGK 730
P+R+ + + PP HPA+ + P L P+ PH R PPSGK
Sbjct: 46 PYRSPVT-LPPPPPHPAYSRPVALPPTLPIPHPSPHAERFYYRQSPPPPSGK 96
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 493 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT 645
+PP T+P T PV PP + P T P P+ PTP V T
Sbjct: 165 KPPTTTPPVKPPTTTPPVQPPT--YNPPTTPVKP-PTAPPVKPPTPPPVRT 212
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/88 (31%), Positives = 31/88 (35%)
Frame = +1
Query: 370 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 549
IPST S SPP S H T P SPS P + P
Sbjct: 81 IPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPT--PKKSPSPPPTPSLPPPA 138
Query: 550 PPVSCWTPATVSSTPCPSTKDTHSPTPS 633
P S TP S P P+ K + P PS
Sbjct: 139 PKKSPSTP----SLPPPTPKKSPPPPPS 162
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 478 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 627
++ + RP S KP SR P P + P+ VSS PS + SPT
Sbjct: 223 TRSNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSS-KAPSRGTSPSPT 271
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
PP + P+ P +PP P TVSS P P + P P
Sbjct: 37 PPPSPPADSSPPPALPSLPPAVFSPPPTVSSPPPPPLDSSPPPPP 81
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
HS PP SP P PP+ TP + P PS++ T PTPS
Sbjct: 623 HSPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTP---TQAPTPSSETTQVPTPS 672
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 TSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPT-PSCV 639
++P+KPC T PV PP + P PS + +PT PS V
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPSRGLSPNPTDPSGV 71
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
HS PP S P + P PPV P S P S +SP P
Sbjct: 594 HSPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPP 642
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +1
Query: 484 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCP---STKDTHSPTP 630
HS PP SP P P PPV P V S P P HSP P
Sbjct: 541 HSPPPPVHSPPPPPVYSPPPPPPPVHS-PPPPVFSPPPPVYSPPPPVHSPPP 591
Score = 27.5 bits (58), Expect = 10.0
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTK-DTHSPTPSCVWT*P 651
CSK ++PSKP PV P T TP P+T SP P+ P
Sbjct: 407 CSKDKCAGGSSTPSKP-----SPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKP 461
Query: 652 VATSQTTL*RSSPSAAT 702
T + SP AT
Sbjct: 462 SPVPTTPVHEPSPVLAT 478
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKD----THSPTP-SCVWT*PVAT 660
P SP R P VP P T+S P PS + + SP P S P +
Sbjct: 99 PRVASPRPTSPRVASPRVPSPRAEVPRTLSPKP-PSPRAEVPRSLSPKPPSPRADLPRSL 157
Query: 661 SQTTL*RSSPSAATRSLPPAER 726
S RS PS+A+ + PP R
Sbjct: 158 SPKPFDRSKPSSASANAPPTLR 179
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKD----THSPTP-SCVWT*PVAT 660
P SP R P VP P T+S P PS + + SP P S P +
Sbjct: 98 PRVASPRPTSPRVASPRVPSPRAEVPRTLSPKP-PSPRAEVPRSLSPKPPSPRADLPRSL 156
Query: 661 SQTTL*RSSPSAATRSLPPAER 726
S RS PS+A+ + PP R
Sbjct: 157 SPKPFDRSKPSSASANAPPTLR 178
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/70 (34%), Positives = 28/70 (40%)
Frame = +1
Query: 499 PCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL* 678
P TSPS S P P VS P S+P S HS P + P + S +
Sbjct: 139 PTTSPSSAKSPAITPSSPAVSHSPPPVRHSSPPVS----HSSPPVSHSSPPTSRSSPAVS 194
Query: 679 RSSPSAATRS 708
SSP A S
Sbjct: 195 HSSPVVAASS 204
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL 675
P ++P P P P S +PA S+P S HSP P + PV+ S +
Sbjct: 126 PAASTPVSP--PVESPTTSPSSAKSPAITPSSPAVS----HSPPPVRHSSPPVSHSSPPV 179
Query: 676 *RSSPSAATRSLP 714
SSP +RS P
Sbjct: 180 SHSSP-PTSRSSP 191
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Frame = +1
Query: 487 STRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PV 654
S+ PP SP P T PV PP P + + P SP P P
Sbjct: 69 SSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPP 128
Query: 655 AT-SQTTL*RSSPSAATRSLPPAE 723
T + T +SPS T PP E
Sbjct: 129 PTEAPPTTPITSPSPPTNPPPPPE 152
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/75 (30%), Positives = 27/75 (36%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTTL 675
PP P P +P PP + P ST P T P P++ QTT
Sbjct: 46 PPQPDPQPPTPPTFQPA-PPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTT- 103
Query: 676 *RSSPSAATRSLPPA 720
P A T PPA
Sbjct: 104 -PPPPPAITPPPPPA 117
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSSTPCPSTKDTHSPTPSCVWT*PVATSQTT 672
PP S S P T P +PP P + +TP P T P P+ T P++
Sbjct: 71 PPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAI--TPPLSPPPPA 128
Query: 673 L*RSSPSAAT-RSLPP 717
+ P A T +LPP
Sbjct: 129 ITPPPPLATTPPALPP 144
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 361 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 272
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
PP PS P + PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
PP PS P + PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
PP PS P + PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 353 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 246
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 490 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTP 630
TR P ++ +KP + VVPP ++ +++P S + + P P
Sbjct: 103 TRNPSSTIAKPKPVASSAVVPPPKISRSSSPANSPAVSVRASQPPVP 149
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 226 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 104
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels
between the genome sequence and the cDNA prevent
identical translations from being annotated; the basis
for this is under investigation.
Length = 87
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCV 639
PP SPS T PP C+TP + T S T+ TP V
Sbjct: 33 PPVESPSPVV---TPTAEPPARCFTPYSSQRTHSGSNNSTNRLTPDHV 77
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPST 606
P SPS P P VP S TP+ S P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +1
Query: 475 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 633
CS +RP S C R PP+ P S P P +SP PS
Sbjct: 380 CSAFLSRPSVDCGSFGCGRSVVKPSPPIVALPPPPPPSPPLP--PPVYSPPPS 430
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 10.0
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 290
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 291 RG--ILTLKYPIEHGIVTNWDDMEK 359
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATV-SSTPCPST 606
PP +P+ T V P+ PAT+ SSTP P +
Sbjct: 127 PPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDS 164
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATV-SSTPCPST 606
PP +P+ T V P+ PAT+ SSTP P +
Sbjct: 127 PPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDS 164
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +3
Query: 339 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 518
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 519 AVLSLYASGRTTGIVL 566
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,257,230
Number of Sequences: 28952
Number of extensions: 449074
Number of successful extensions: 1764
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -