Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0861
         (662 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55B64 Cluster: PREDICTED: similar to transmembr...    36   0.66 
UniRef50_Q1JCM4 Cluster: Putative uncharacterized protein; n=5; ...    35   2.0  
UniRef50_Q95JU1 Cluster: Putative uncharacterized protein; n=2; ...    34   2.7  

>UniRef50_UPI0000D55B64 Cluster: PREDICTED: similar to transmembrane
           channel-like 7; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to transmembrane channel-like 7 - Tribolium
           castaneum
          Length = 738

 Score = 36.3 bits (80), Expect = 0.66
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
 Frame = -2

Query: 355 FLTLYIFTKLTQFIISQFLKHMDS-TQN--NNKLIYFTFVL**HYRSSGI--FRFYSNEL 191
           FL L+IFT +  FII   +  ++S TQN  N+  + F  +    +    +  + FY NE 
Sbjct: 203 FLNLFIFTVIFLFIILPTILLVNSDTQNPPNSSNVVFDLIQGTGFMEHSLLFYGFYPNET 262

Query: 190 FRYYFN*SLYRGAANI*YVCCSADNFYRTLLITLLFSLTQQI*RYKER-INFYISLFLNC 14
           F Y  N S+      + YVC +   ++ T L++++ S       +KER I      +  C
Sbjct: 263 FDYLVNESVMYYNLPLAYVCITV-VYFATSLVSMVKSAAN---GFKERLIEGEGQFYQYC 318

Query: 13  FFVF 2
            F+F
Sbjct: 319 NFIF 322


>UniRef50_Q1JCM4 Cluster: Putative uncharacterized protein; n=5;
           Streptococcus pyogenes|Rep: Putative uncharacterized
           protein - Streptococcus pyogenes serotype M12 (strain
           MGAS2096)
          Length = 75

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 370 HKINTFLTLYIFTKLTQFIISQFLKHMD-STQNNNKL 263
           HKINTFL L++ T +  FI + FLK  D S  N N+L
Sbjct: 9   HKINTFLHLFLITLVFMFIENVFLKCFDNSFINKNEL 45


>UniRef50_Q95JU1 Cluster: Putative uncharacterized protein; n=2;
           Eutheria|Rep: Putative uncharacterized protein - Macaca
           fascicularis (Crab eating macaque) (Cynomolgus monkey)
          Length = 854

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -2

Query: 496 LPHSNAFGATYQ-TNVLIVCIFICLFVLIYSSRXXXXXXISLEHKINTFLTLYIFTKLTQ 320
           L H+  F   ++    L++ + I  FV+ + SR        L+H    FLTLY+   L +
Sbjct: 394 LCHTIVFTEEFEYVGYLVILMNIFPFVISWISRLNAIYRRELKHTNYCFLTLYVLEALLK 453

Query: 319 FIISQFLKHMDSTQNNNKLIYF 254
            I  + L+ +D   +  K  ++
Sbjct: 454 LIAPKVLQIIDKRVSQQKTFWY 475


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,123,231
Number of Sequences: 1657284
Number of extensions: 9188518
Number of successful extensions: 21504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21478
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)