SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0861
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.97 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    24   1.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   3.9  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   3.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   3.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   3.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   3.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   5.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   5.2  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 469 TYQTNVLIVCIFICLFVLIYSSRXXXXXXISLEHKINTFLTLY 341
           T +T   I     C+F++ Y          SL H +  FLT++
Sbjct: 771 TQKTGSKIHLFVKCVFLMGYQIFDWVQKEQSLAHSVGVFLTIF 813


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 521 CILGSHTQTPTLERVWRDIP 462
           CILG    TP  E + RDIP
Sbjct: 46  CILGKGKCTPEGEELKRDIP 65


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 530 FHTCILGSHTQTPTLERVWRDIPN 459
           +  C+LG+   TP+ E + +DIP+
Sbjct: 41  YFECLLGTGKCTPSGEELKKDIPD 64


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 570 NNDYFRSFLPAVNSPPAPH 626
           N DY R +LP + + P+ +
Sbjct: 438 NGDYIRKYLPVLKNMPSQY 456


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 545  CSHSRFHTCILGSHTQTPTLERVWRDIPNKRFNSL 441
            C+H  +   +L S + T      W DI N+ +  +
Sbjct: 2350 CTHINYGFAVLDSSSMTLKPHDSWADIDNEFYKKV 2384


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 521 CILGSHTQTPTLERVWRDIP 462
           C+LG    TP  E + +DIP
Sbjct: 46  CVLGKGKCTPEGEELKKDIP 65


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 521 CILGSHTQTPTLERVWRDIP 462
           C+LG    TP  E + +DIP
Sbjct: 46  CVLGKGKCTPEGEELKKDIP 65


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 358 TFLTLYIFTKLTQFIISQFLKHMDSTQNNNKLIYF 254
           +++ L  F     FI+ Q    +   +NN + IYF
Sbjct: 288 SYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYF 322


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 358 TFLTLYIFTKLTQFIISQFLKHMDSTQNNNKLIYF 254
           +++ L  F     FI+ Q    +   +NN + IYF
Sbjct: 288 SYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYF 322


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 358 TFLTLYIFTKLTQFIISQFLKHMDSTQNNNKLIYF 254
           +++ L  F     FI+ Q    +   +NN + IYF
Sbjct: 288 SYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYF 322


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 478 FGATYQTNVLIVCIFICLFV 419
           F  T+QTNV++     CL+V
Sbjct: 100 FDGTFQTNVVVKHNGSCLYV 119


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 478 FGATYQTNVLIVCIFICLFV 419
           F  T+QTNV++     CL+V
Sbjct: 100 FDGTFQTNVVVKHNGSCLYV 119


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 478 FGATYQTNVLIVCIFICLFV 419
           F  T+QTNV++     CL+V
Sbjct: 100 FDGTFQTNVVVKHGGSCLYV 119


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 478 FGATYQTNVLIVCIFICLFV 419
           F  T+QTNV++     CL+V
Sbjct: 100 FDGTFQTNVVVKHGGSCLYV 119


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 478 FGATYQTNVLIVCIFICLFV 419
           F  T+QTNV++     CL+V
Sbjct: 100 FDGTFQTNVVVKHGGSCLYV 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,208
Number of Sequences: 336
Number of extensions: 2869
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -