Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0860
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 53 2e-07
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 53 2e-07
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 53 2e-07
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 53 2e-07
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 53 2e-07
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 53 2e-07
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 53 2e-07
BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 1.1
BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor p... 31 1.1
BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 1.1
AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 1.1
AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8 (cystatin-re... 31 1.1
AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related epidid... 31 1.1
BC039295-1|AAH39295.1| 530|Homo sapiens family with sequence si... 28 7.7
AC007272-2|AAX88971.1| 111|Homo sapiens unknown protein. 28 7.7
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKL-EGDVVKVKNV 263
+ H G CP NF++ Y G WYEI K E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 264 HM-IDGVKKSIEG---TVKLTDDA 323
+ DG IEG V LT+ A
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPA 103
>BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESE 197
G +LKPVN N Q +W+ + +++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor
protein.
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESE 197
G +LKPVN N Q +W+ + +++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESE 197
G +LKPVN N Q +W+ + +++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESE 197
G +LKPVN N Q +W+ + +++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 134
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESE 197
G +LKPVN N Q +W+ + +++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related
epididymal spermatogenic protein protein.
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESE 197
G +LKPVN N Q +W+ + +++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC039295-1|AAH39295.1| 530|Homo sapiens family with sequence
similarity 126, member B protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 234 PVCIQLKSIYRSSQIRWKISRFHTRCLGKL 145
PVC QL +YRSS++R K RF + L +L
Sbjct: 55 PVCHQLFELYRSSEVRLK--RFTLQFLPEL 82
>AC007272-2|AAX88971.1| 111|Homo sapiens unknown protein.
Length = 111
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 234 PVCIQLKSIYRSSQIRWKISRFHTRCLGKL 145
PVC QL +YRSS++R K RF + L +L
Sbjct: 55 PVCHQLFELYRSSEVRLK--RFTLQFLPEL 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,223,618
Number of Sequences: 237096
Number of extensions: 570433
Number of successful extensions: 938
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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