BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0860 (326 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 1.0 AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 1.0 AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 1.0 AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 1.0 Z68014-13|CAA92028.2| 582|Caenorhabditis elegans Hypothetical p... 28 1.8 AY887916-1|AAX34428.1| 582|Caenorhabditis elegans anion transpo... 28 1.8 U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 27 4.2 U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical pr... 26 5.6 Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 25 9.7 >AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A protein. Length = 4280 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKLE 236 G L P N NL + + +S + ++ + KCS+ YKLE Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVS-WQAPNQNSWKCSAIRYKLE 2464 >AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B protein. Length = 4450 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKLE 236 G L P N NL + + +S + ++ + KCS+ YKLE Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVS-WQAPNQNSWKCSAIRYKLE 2464 >AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein 805, isoform b protein. Length = 4450 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKLE 236 G L P N NL + + +S + ++ + KCS+ YKLE Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVS-WQAPNQNSWKCSAIRYKLE 2464 >AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein 805, isoform a protein. Length = 4280 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 102 GTCPELKPVNNFNLTAYQGIWYEISKFSNESEKNGKCSSAEYKLE 236 G L P N NL + + +S + ++ + KCS+ YKLE Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVS-WQAPNQNSWKCSAIRYKLE 2464 >Z68014-13|CAA92028.2| 582|Caenorhabditis elegans Hypothetical protein W04G3.6d protein. Length = 582 Score = 27.9 bits (59), Expect = 1.8 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -1 Query: 227 VFS*RAFTVLLRFVGKFRDFIPDALVSCQVEVVHR 123 +FS T++L F+G++ + +P L+SC V V R Sbjct: 363 IFSALVLTLVLFFIGQYLEGLPMCLLSCIVIVALR 397 >AY887916-1|AAX34428.1| 582|Caenorhabditis elegans anion transporter SULP-7d protein. Length = 582 Score = 27.9 bits (59), Expect = 1.8 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -1 Query: 227 VFS*RAFTVLLRFVGKFRDFIPDALVSCQVEVVHR 123 +FS T++L F+G++ + +P L+SC V V R Sbjct: 363 IFSALVLTLVLFFIGQYLEGLPMCLLSCIVIVALR 397 >U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical protein C18H9.3 protein. Length = 918 Score = 26.6 bits (56), Expect = 4.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +3 Query: 159 IWYEISKFSNESEKNGKCSSAEYKLEGDVVKV 254 +W++ F++ES + + + EYK GD+ K+ Sbjct: 399 VWFKAGYFTDESLRVQRGENGEYKTIGDLKKL 430 >U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical protein ZC449.1 protein. Length = 454 Score = 26.2 bits (55), Expect = 5.6 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +3 Query: 174 SKFSNESEKNGKCSSAEYKLEGDVVKVK 257 S+ + S NG S +YK+ G+ V+V+ Sbjct: 415 SESESSSPSNGGWSECDYKINGETVRVR 442 >Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical protein C33G3.6 protein. Length = 624 Score = 25.4 bits (53), Expect = 9.7 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 186 NESEKNGKCSSAEYKLEGDVVKVK 257 ++SE NGKCS E + E ++++K Sbjct: 170 HDSESNGKCSEEEDEDESYLIQLK 193 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,974,327 Number of Sequences: 27780 Number of extensions: 95432 Number of successful extensions: 255 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 255 length of database: 12,740,198 effective HSP length: 71 effective length of database: 10,767,818 effective search space used: 398409266 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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