Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0859
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.064
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.15
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.26
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.78
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 1.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.4
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 27 1.8
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 27 1.8
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 1.8
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 2.4
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 2.4
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 26 4.2
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 4.2
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 26 5.5
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 5.5
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 7.3
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 7.3
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 7.3
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.3 bits (70), Expect = 0.064
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = +2
Query: 278 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 457
S+E + S QS +T + KT A+ T T + SA + T ++ +A
Sbjct: 226 SSESTIANSDQSSFITYESTQNPTANKTDASQQSTESTSS--SASAYSYITTLQTATTAQ 283
Query: 458 GLIRFRSAKTKK*Q-TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 634
+ T T S P + S + S + P +A++ +S + AST A +
Sbjct: 284 QTTSENTYSTSGPNLTTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANT 343
Query: 635 PFSRSETP 658
SRS P
Sbjct: 344 IISRSSKP 351
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.1 bits (67), Expect = 0.15
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Frame = +2
Query: 275 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
+S S+ PQS +ASS T +T S +S + +P+T S +
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPS 527
Query: 455 CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVN-----ITSVSRALPAST 619
+I S+ + S++ P S + S T+ I+ + +SVS L +ST
Sbjct: 528 SSII---SSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST 584
Query: 620 VAPS 631
+PS
Sbjct: 585 SSPS 588
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.3 bits (65), Expect = 0.26
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 SLSTPQIPNXXXXXXXXXXXLSAERGHSL----SPQSPLLTVRDCTASSLMKTSATFSGT 382
SLST IP+ LS+ S S S +++ ++SS TS+T S +
Sbjct: 234 SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSS 293
Query: 383 AGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTL 562
+ + P +++ ++ S +S + S+ + + ++ P S T++ S+ +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTL---SSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
Query: 563 IPKIAVNITSVSRALP--ASTVAPSEPFSRS 649
+ TS S++ +STV+ S S S
Sbjct: 351 SSSSFSSTTSSSKSSSSFSSTVSSSSSTSSS 381
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.78
Identities = 30/123 (24%), Positives = 52/123 (42%)
Frame = +2
Query: 290 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIR 469
GH+ + S T TA+S + +SAT S T+ + + D+ T PAS+
Sbjct: 141 GHASASTSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFS 200
Query: 470 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 649
T + S+ SP S + +P ++ S +L +S+V P+ + +
Sbjct: 201 -TITNTSMIPSSSSFTTTTGSPYYNTS--SFLPSSVIS----SASLSSSSVLPTSIITST 253
Query: 650 ETP 658
TP
Sbjct: 254 STP 256
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +1
Query: 148 ISCDKYWKCDN----GVAELKTCGNGLAFDATDS--KYLTENCDYLHN 273
+ CD+ W C+N G+ L C NG+ +D K L D L N
Sbjct: 30 LKCDRVWPCENCKKRGIPNL--CPNGILVSVSDKLIKLLLSRIDTLQN 75
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 1.4
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +2
Query: 359 TSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT 538
TS+ F+ T+G P + ++ P +T +P S F + T T SA+ P S
Sbjct: 621 TSSGFNTTSGL--PTSSASTPLSNSTVAPTSTFTSSGFNT--TSGLPTSSASTPSSNSSI 676
Query: 539 LARSAVT---LIPKIAVNITSVSRALPASTVAPSEPFSRS 649
+ S T + +S S L STVAP+ F+ S
Sbjct: 677 VPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSS 716
Score = 25.4 bits (53), Expect = 7.3
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 338 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 517
T+SSL +SAT S A + + A+ + ++ +S+ S+ T S++
Sbjct: 105 TSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSST 164
Query: 518 PPVRSPTLARSAV-TLIPKIAVNITSVSRALPASTV 622
S T SA + + A + ++ S +L +S++
Sbjct: 165 NSTTSATPTSSATSSSLSSTAASNSATSSSLASSSL 200
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 27.5 bits (58), Expect = 1.8
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +2
Query: 347 SLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPV 526
++M T+A + +A T A+ D+ ++ + S+ ++ T T AA V
Sbjct: 139 TVMYTTAVYGDSATTPAASEAQASSDILSSLASLSSASTDNLAASVTP---TTVAAS--V 193
Query: 527 RSPTLARSAVTLIPKIAVNITS-VSRALPASTVAPSEPFSRSET 655
S SA I + + TS VS +P+S ++ + P S SE+
Sbjct: 194 ASSVDTDSASATISSVVDSATSSVSTVIPSSIISAAPPDSASES 237
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 27.5 bits (58), Expect = 1.8
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +2
Query: 389 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT-LARSAVTLI 565
T P S +LPT + S +S + QT +PP SPT + ++ ++
Sbjct: 135 TTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSID 192
Query: 566 PKIAVNITSVSRALPASTVAPSEPFSRSETP 658
P +A + S +T + P SR P
Sbjct: 193 PSVAFSSKST-----LATTRTNAPLSRPSQP 218
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 518 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 649
P +RS +L S V LIP + + + S + PAS P S S
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPASGAVSRTPSSVS 482
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 421
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 421
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 503 DSAAQPPVRSPTLARSAV-TLIPKIAVNITSVSRALPASTVAPSEPFS 643
+S+AQ P A SA T P TS AST++PS PFS
Sbjct: 349 NSSAQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFS 396
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 172 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
C N V LK NG + S+ L+E C Y N C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 5.5
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +2
Query: 335 CTASSLMKTSATFSG-TAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 511
C SSL KT + TA P I+ ++ + L+R K+ D+
Sbjct: 314 CELSSLSKTDISLPFITADATGPKHINM--EISRAQFEKLVDPLVRRTIDPCKRALKDAN 371
Query: 512 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 634
Q + + +T +P++ + S+ + PA +V P E
Sbjct: 372 LQTSEINEVILVGGMTRMPRVVETVKSIFKREPAKSVNPDE 412
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1191 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1238
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1273 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1320
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 500 TDSAAQPPVRSPTLARSAV 556
++SAA PPV SP L RS +
Sbjct: 479 SNSAASPPVSSPGLRRSHI 497
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 7.3
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = +2
Query: 311 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKT 487
SPL T CT S+ + + + PP +++ P + S+ G T
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 488 KK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPAST 619
T S + PP + T +P + + TS PAST
Sbjct: 336 STSCTTSTSIPPTGNST--TPVTPTVPPTSTSSTSTPPP-PAST 376
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 7.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 346 FPDENKCDVFWNCW 387
F D N D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.4 bits (53), Expect = 7.3
Identities = 21/95 (22%), Positives = 43/95 (45%)
Frame = +2
Query: 374 SGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 553
S A + + A SA +PT+ S + ++ S SAA V +P ++ +A
Sbjct: 202 SSVASSSEISAGSATSYVPTSSSSIALSSVVASASV--------SAANKGVSTPAVSSAA 253
Query: 554 VTLIPKIAVNITSVSRALPASTVAPSEPFSRSETP 658
+ ++ ++S + +ST++ + S S +P
Sbjct: 254 ASSSAVVSSVVSSATSVAASSTISSATSSSASASP 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,751,850
Number of Sequences: 5004
Number of extensions: 56411
Number of successful extensions: 203
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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