Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0858
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.041
UniRef50_Q2JGX9 Cluster: Peptidase S1 and S6, chymotrypsin/Hap; ...    33   6.2  
UniRef50_A1T9R2 Cluster: PE-PPE, C-terminal domain protein precu...    33   6.2  
UniRef50_Q0V0K1 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   6.2  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 40.3 bits (90), Expect = 0.041
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +3

Query: 513 SLATKGSTSKLTHRHGPLSFSPDLLRGPRFRSRGRF 620
           SL T G +++  HR  PLSFSPDLL G RFR+   +
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415



 Score = 39.1 bits (87), Expect = 0.095
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 311 AEWWSLPAQTHKRSYH 358
           AEWW LPA+THKRSYH
Sbjct: 569 AEWWYLPARTHKRSYH 584


>UniRef50_Q2JGX9 Cluster: Peptidase S1 and S6, chymotrypsin/Hap;
           n=3; Frankia|Rep: Peptidase S1 and S6, chymotrypsin/Hap
           - Frankia sp. (strain CcI3)
          Length = 579

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = +3

Query: 480 HDSRSPSTPNPSLATKGSTSKLTHRHGPLSFSPDLLRGPRFRSRG 614
           HDS SP  P P  +  G+ +   H  GP S  PDL  GP  R  G
Sbjct: 27  HDSPSPWAP-PIGSAAGTPAGQAHPAGPASSEPDLPAGPPSRPPG 70


>UniRef50_A1T9R2 Cluster: PE-PPE, C-terminal domain protein
           precursor; n=1; Mycobacterium vanbaalenii PYR-1|Rep:
           PE-PPE, C-terminal domain protein precursor -
           Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
          Length = 768

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +2

Query: 146 DRAHSPVLSGYWSPYTSTT*LRHPPRDISSKVSCIVTTAALPFKPKRMTASRQK*AEWWS 325
           D +H+  ++G W  YT T  L + P D   K++  VT   +PFKP  ++ +  +   WW+
Sbjct: 355 DLSHALEVTGSWWVYTPTNVLGYDPAD-PPKITA-VTNLLIPFKP--LSNALGEHVSWWA 410


>UniRef50_Q0V0K1 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 383

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 85  IHAISSSCIPCLFFCCCFDG*-PSSQPGVKWLLEPIHIYNVIAPPTSR 225
           I  +S +C P + F   FDG  P S+ GV+WLL    IY  + PP  R
Sbjct: 229 IGEVSMTCTPAITF---FDGVNPPSETGVRWLLSA--IYKQVYPPIHR 271


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,639,276
Number of Sequences: 1657284
Number of extensions: 13359749
Number of successful extensions: 36068
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36051
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)