Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0858
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   0.98 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   9.1  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 537 SKLTHRHGPLSFSPDLLRGPRFRSRGRFCEALLF 638
           ++ TH + P  F+  LLR P  RS G  C   LF
Sbjct: 350 TRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLF 383


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 172 WLLEPIHIYNVIAPPTSRYKL 234
           WL  P  + N + P + R+KL
Sbjct: 7   WLTPPHSLGNTVTPVSLRFKL 27


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 276 LKGRAAVVTIHETLELISRGGWRNYV 199
           ++ RA +  I   + L+S G W NY+
Sbjct: 247 IEQRADLWIIPIAIFLVSLGWWENYI 272


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 276 LKGRAAVVTIHETLELISRGGWRNYV 199
           ++ RA +  I   + L+S G W NY+
Sbjct: 247 IEQRADLWIIPIAIFLVSLGWWENYI 272


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 276 LKGRAAVVTIHETLELISRGGWRNYV 199
           ++ RA +  I   + L+S G W NY+
Sbjct: 247 IEQRADLWIIPIAIFLVSLGWWENYI 272


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 276 LKGRAAVVTIHETLELISRGGWRNYV 199
           ++ RA +  I   + L+S G W NY+
Sbjct: 247 IEQRADLWIIPIAIFLVSLGWWENYI 272


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 271 LQTETHDCFTAEIGRVVVPTRADSQEV 351
           +QT+  +   + +G+  +PT  D QE+
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQEL 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,271
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)