Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0856
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14VH3 Cluster: MAX dimerization protein; n=2; Apocrita... 73 8e-12
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 63 5e-09
UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n... 59 1e-07
UniRef50_Q4RJC9 Cluster: Chromosome 18 SCAF15038, whole genome s... 56 1e-06
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 54 3e-06
UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse tr... 54 4e-06
UniRef50_Q05195 Cluster: MAD protein; n=28; Euteleostomi|Rep: MA... 52 2e-05
UniRef50_Q7SX95 Cluster: Max-interacting transcriptional repress... 51 3e-05
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 49 8e-05
UniRef50_Q14582 Cluster: Max-interacting transcriptional repress... 48 2e-04
UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n... 48 3e-04
UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse tr... 46 0.001
UniRef50_A0A9R4 Cluster: BHLH transcription factor MAD; n=1; Mol... 44 0.002
UniRef50_Q9NDP3 Cluster: Not7; n=1; Ciona intestinalis|Rep: Not7... 44 0.004
UniRef50_Q9BW11 Cluster: Max-interacting transcriptional repress... 43 0.005
UniRef50_P50539 Cluster: MAX-interacting protein 1; n=44; Eutele... 42 0.017
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 40 0.051
UniRef50_Q9W6H2 Cluster: Basic helix-loop-helix transcription fa... 40 0.051
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 39 0.088
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 38 0.15
UniRef50_Q17IF3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_Q6CH53 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 34 3.3
UniRef50_Q4RNQ4 Cluster: Chromosome 2 SCAF15010, whole genome sh... 33 5.8
UniRef50_A7BT97 Cluster: Serine/threonine protein kinase; n=1; B... 33 7.7
>UniRef50_Q14VH3 Cluster: MAX dimerization protein; n=2;
Apocrita|Rep: MAX dimerization protein - Apis mellifera
(Honeybee)
Length = 250
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/65 (58%), Positives = 45/65 (69%)
Frame = +2
Query: 110 MSIADLIQAAEFIERRDRVLFIADAEHGYASALPIYEDXXXXXXXXXXXXSQGSRTTHNE 289
MSIA L+QAAE+IERR+R +AEHGYAS +P+ +D SQGSRTTHNE
Sbjct: 1 MSIAALLQAAEYIERRER-----EAEHGYASTMPMPDDMRTVTKRPKTKKSQGSRTTHNE 55
Query: 290 LEKNR 304
LEKNR
Sbjct: 56 LEKNR 60
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +1
Query: 397 RSWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFF 576
+SWT K A+R R+DAFE+WC + A R+ SIL++++ L + LK ++F
Sbjct: 203 KSWTIKKAERQRMDAFELWCWRRLLRVPWTARRSTQSILKEISPGCSLEGLMLKLKLQYF 262
Query: 577 GHIARTSGDNLEKLIVTGQI 636
GH+ R + D+LEK ++ G+I
Sbjct: 263 GHLMRRA-DSLEKTLMLGKI 281
>UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n=9;
Bos taurus|Rep: UPI0000F32779 UniRef100 entry - Bos
Taurus
Length = 263
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +1
Query: 400 SWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFG 579
SWT K A+ RIDAFE+WC + R+N SIL++++ I L I LK ++FG
Sbjct: 130 SWTVKKAEGQRIDAFELWCWRRLLRVPWTERRSNQSILKEISPGISLEEIMLKLKLQYFG 189
Query: 580 HIARTSGDNLEK 615
H+ + S D+LEK
Sbjct: 190 HLMQ-SVDSLEK 200
>UniRef50_Q4RJC9 Cluster: Chromosome 18 SCAF15038, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
SCAF15038, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 282
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 113 SIADLIQAAEFIERRDRVLFIADAEHGYASALPIYEDXXXXXXXXXXXX--SQGSRTTHN 286
S+ L++AAE++ERRDR +AEHGYAS LP D +Q +R++HN
Sbjct: 5 SLLILLEAAEYLERRDR-----EAEHGYASVLPYTNDFSRKKTKASPMSRKTQNNRSSHN 59
Query: 287 ELEKNRYVA 313
ELEK+RY A
Sbjct: 60 ELEKHRYAA 68
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 54.0 bits (124), Expect = 3e-06
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +1
Query: 298 EQVCCSRVCNTKTDIGEY*NILNQVL*N-FKLDYRSWTPKSADRHRIDAFEMWCCGNGRC 474
E+V S+V + T I I+N ++ F SWT K DR +IDAFE+WC
Sbjct: 105 EKVWKSKVISIVTKI----RIINAIVFPIFMYACESWTLKKKDRRKIDAFELWCWRQMMR 160
Query: 475 YEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFGHIARTSGDNLEKLIVTGQIA 639
+ A TN +IL ++ + L K+ FFGHI +T +++E G ++
Sbjct: 161 IPWAAKITNKTILERVKQNVSLEGKITKQRLSFFGHIMQT--NSMETAFTLGAVS 213
>UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 281
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +1
Query: 400 SWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFG 579
SW DR R+DAFEMWC + +TN +L ++ + + ++R +FG
Sbjct: 194 SWAMTKNDRKRVDAFEMWCYRRLLQVSWKDKKTNVWVLEKIRTDLTIKKGIMERKLYYFG 253
Query: 580 HIARTSGDNLEKLIVTGQI 636
HI R S + +EK I+ G +
Sbjct: 254 HIVRRS-EGIEKQILQGAV 271
>UniRef50_Q05195 Cluster: MAD protein; n=28; Euteleostomi|Rep: MAD
protein - Homo sapiens (Human)
Length = 221
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 104 IKMSIADLIQAAEFIERRDRVLFIADAEHGYASALPIY--EDXXXXXXXXXXXXSQGSRT 277
++M+I L++AA+++ERR+R +AEHGYAS LP + + SR+
Sbjct: 5 VRMNIQMLLEAADYLERRER-----EAEHGYASMLPYNNKDRDALKRRNKSKKNNSSSRS 59
Query: 278 THNELEKNRYVAAEFVIRK 334
THNE+EKNR + K
Sbjct: 60 THNEMEKNRRAHLRLCLEK 78
>UniRef50_Q7SX95 Cluster: Max-interacting transcriptional repressor
MAD3; n=4; Euteleostomi|Rep: Max-interacting
transcriptional repressor MAD3 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 200
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 113 SIADLIQAAEFIERRDRVLFIADAEHGYASALPIYEDXXXXXXXXXXXXSQ----GSRTT 280
+I L+QAAE++ERR+R +AEHGYAS LP Y + S SR+
Sbjct: 7 NIQVLLQAAEYLERRER-----EAEHGYASVLPFYSNGVSDKRKKQKSKSHSSPGNSRSV 61
Query: 281 HNELEKNR 304
HNELEK+R
Sbjct: 62 HNELEKHR 69
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 49.2 bits (112), Expect = 8e-05
Identities = 29/79 (36%), Positives = 39/79 (49%)
Frame = +1
Query: 400 SWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFG 579
SWT AD +RI A EMW + RTN S+L++LN + L + +FG
Sbjct: 277 SWTLLKADENRIMAAEMWFWRKMLKISWKDKRTNLSVLQELNTERDLLGKVARLKLGYFG 336
Query: 580 HIARTSGDNLEKLIVTGQI 636
HI R SG L I+ Q+
Sbjct: 337 HILRGSGSPLAAQIIESQV 355
>UniRef50_Q14582 Cluster: Max-interacting transcriptional repressor
MAD4; n=36; Euteleostomi|Rep: Max-interacting
transcriptional repressor MAD4 - Homo sapiens (Human)
Length = 209
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +2
Query: 113 SIADLIQAAEFIERRDRVLFIADAEHGYASALPIYED--XXXXXXXXXXXXSQGSRTTHN 286
S+ L++AAE++ERRDR +AEHGYAS LP D + +R++HN
Sbjct: 5 SLLILLEAAEYLERRDR-----EAEHGYASVLPFDGDFAREKTKAAGLVRKAPNNRSSHN 59
Query: 287 ELEKNR 304
ELEK+R
Sbjct: 60 ELEKHR 65
>UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n=3;
Bos taurus|Rep: UPI0000F33B2A UniRef100 entry - Bos
Taurus
Length = 253
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +1
Query: 412 KSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFGHIAR 591
K A+ + D FE+WC + A R+N SIL++++ I L + LK ++FGH
Sbjct: 130 KKAECRKTDVFELWCWRRLLRVPWTAGRSNQSILKEISPGISLEGMMLKLKLQYFGH--- 186
Query: 592 TSGDNLEKLIVTGQI 636
D+LEK ++ G+I
Sbjct: 187 RRADSLEKTLMLGKI 201
>UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=4; Deuterostomia|Rep: PREDICTED:
similar to reverse transcriptase-like -
Strongylocentrotus purpuratus
Length = 565
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 400 SWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFG 579
SW DR R+DAFEMWC + +TN +L ++ + + ++R +FG
Sbjct: 172 SWAMTKNDRKRVDAFEMWCYRRLLQVSWKDKKTNVWVLEKIGTDLTIRRGIMERKLNYFG 231
Query: 580 HI 585
HI
Sbjct: 232 HI 233
>UniRef50_A0A9R4 Cluster: BHLH transcription factor MAD; n=1;
Molgula tectiformis|Rep: BHLH transcription factor MAD -
Molgula tectiformis
Length = 203
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 125 LIQAAEFIERRDRVLFIADAEHGYASALPIYEDXXXXXXXXXXXXSQGSRTTHNELEKNR 304
LI+AA++IE + +++HGYAS +D SRT+HNELEKNR
Sbjct: 17 LIKAADYIETCENEKRHRESDHGYASTYRYIDDNEPLHKRVKITKKNQSRTSHNELEKNR 76
>UniRef50_Q9NDP3 Cluster: Not7; n=1; Ciona intestinalis|Rep: Not7 -
Ciona intestinalis (Transparent sea squirt)
Length = 213
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 125 LIQAAEFIERRDRVLFIADAEHGYASALPIYEDXXXXXXXXXXXXSQGSRTTHNELEKNR 304
L+QAAEF+E +D+ + EHGYA+ P Y +RT+HNELEKNR
Sbjct: 13 LLQAAEFLENKDKR--DRETEHGYAT--PAYRIGQNFRTKVKTVRRSQNRTSHNELEKNR 68
>UniRef50_Q9BW11 Cluster: Max-interacting transcriptional repressor
MAD3; n=15; Euteleostomi|Rep: Max-interacting
transcriptional repressor MAD3 - Homo sapiens (Human)
Length = 206
Score = 43.2 bits (97), Expect = 0.005
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 113 SIADLIQAAEFIERRDRVLFIADAEHGYASALPIYEDXXXXXXXXXXXXSQGS----RTT 280
+I L+QAAEF+ERR+R +AEHGYAS P + G+ R+
Sbjct: 7 NIQVLLQAAEFLERRER-----EAEHGYASLCPHRSPGPIHRRKKRPPQAPGAQDSGRSV 61
Query: 281 HNELEKNR 304
HNELEK R
Sbjct: 62 HNELEKRR 69
>UniRef50_P50539 Cluster: MAX-interacting protein 1; n=44;
Euteleostomi|Rep: MAX-interacting protein 1 - Homo
sapiens (Human)
Length = 228
Score = 41.5 bits (93), Expect = 0.017
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 14/81 (17%)
Frame = +2
Query: 104 IKM-SIADLIQAAEFIERRDRVLFIADAEHGYASALP------IYEDXXXXXXXXXXXXS 262
+KM ++ L++AAEF+ERR+R + EHGYAS+ P + S
Sbjct: 4 VKMINVQRLLEAAEFLERRER-----ECEHGYASSFPSMPSPRLQHSKPPRRLSRAQKHS 58
Query: 263 QGS-------RTTHNELEKNR 304
GS R+THNELEKNR
Sbjct: 59 SGSSNTSTANRSTHNELEKNR 79
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 39.9 bits (89), Expect = 0.051
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 400 SWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLSTICLKRIFEFFG 579
SWT + +DR++++ FEM C N I ++LNI + KR ++FG
Sbjct: 392 SWTLRKSDRNKLEVFEMRCLRTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCLKWFG 451
Query: 580 HIAR 591
H+ R
Sbjct: 452 HVLR 455
>UniRef50_Q9W6H2 Cluster: Basic helix-loop-helix transcription
factor XMad4-236; n=2; Euteleostomi|Rep: Basic
helix-loop-helix transcription factor XMad4-236 -
Xenopus laevis (African clawed frog)
Length = 236
Score = 39.9 bits (89), Expect = 0.051
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 113 SIADLIQAAEFIERRDRVLFIADAEHGYASALPIYED 223
S+ L++AAE++ERRDR +AEHGYAS LP D
Sbjct: 5 SLLILLEAAEYLERRDR-----EAEHGYASVLPFDSD 36
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 39.1 bits (87), Expect = 0.088
Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Frame = +1
Query: 232 GGETSEDEKIAGKQDYT*RIRKEQVCCSRVCN--TKTDIGEY*NI-LNQVL*NFKLDY-- 396
GG+ +E+ + D RIRK R+ N T I + + L Q L L Y
Sbjct: 833 GGKIAENG--SSTSDIKNRIRKAGAAFQRLNNIWTSKSISSHTKMQLYQSLILSILLYGA 890
Query: 397 RSWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNI-QIRLSTICLKRIFEF 573
SWT K D +R+ FEM C N I LN+ Q + + KRI ++
Sbjct: 891 ESWTVKKEDSNRLQVFEMACLRRIMGVTRLDKIRNTHIKESLNLDQDVMDKVSTKRI-KY 949
Query: 574 FGHIARTSGDNLEKLIVTGQI 636
FGH+ R K+ V G++
Sbjct: 950 FGHVLRMKPTRYPKIAVEGKV 970
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 38.3 bits (85), Expect = 0.15
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 322 CNTKTDIGEY*NILNQVL*NFKLDYRSWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTN 501
C+TK D+ Y ++ +L +WT K D +R+ FEM C N
Sbjct: 784 CSTKVDL--YKVLVLSIL---LYGAETWTLKKVDENRLHTFEMACLRRIMGVTRFDRLRN 838
Query: 502 ASILRQLNI-QIRLSTICLKRIFEFFGHIARTSGDNLEKLIVTGQI 636
I QLN+ + + + KR+ +FGHI R + +++ G I
Sbjct: 839 THIRTQLNMEETIIDRVATKRL-RYFGHINRMNSKRYPHILLNGNI 883
>UniRef50_Q17IF3 Cluster: Putative uncharacterized protein; n=1; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 2052
Score = 37.1 bits (82), Expect = 0.36
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -1
Query: 237 PPGLGSSYIGNAEA*PCSASAMNKTRSRRSM---NSAAWIKSAMLILMVRGVNTAVTNDT 67
P G SS +G + P S S +N+T S S+ +S++++K + L R + +NDT
Sbjct: 1804 PSGPSSSRLGPNKPAPSSHSGINRTASSASVSSTSSSSFVKKSFLSQRSREILARRSNDT 1863
Query: 66 RLHSNETINKS 34
+ +S + NKS
Sbjct: 1864 KSNSTNSSNKS 1874
>UniRef50_Q6CH53 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 305
Score = 33.9 bits (74), Expect = 3.3
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 83 AVFTPRTIKMSIADLIQAAEFIERRDRVLFIADAE 187
A+FTPR KM + + + +F++ DRVL+I D E
Sbjct: 165 ALFTPRGTKMFVNNDHASIQFVDENDRVLWIKDGE 199
>UniRef50_Q4RNQ4 Cluster: Chromosome 2 SCAF15010, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15010, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 191
Score = 33.1 bits (72), Expect = 5.8
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +1
Query: 139 RIHRTP*PSFVHCRRGTRLRLGVTYIRRSQAGGETSEDEKIAGKQDYT*RIRKEQVCCSR 318
R+H++ P CR G + +LG T RR++ G T E E+ G+QD ++ E
Sbjct: 42 RLHQSQSPGSQQCRVGVQFKLGST--RRARTSG-TEEGERGIGEQDTGMAVKAE------ 92
Query: 319 VCNTKTDIGEY 351
+T++GE+
Sbjct: 93 AAFKRTEVGEF 103
>UniRef50_A7BT97 Cluster: Serine/threonine protein kinase; n=1;
Beggiatoa sp. PS|Rep: Serine/threonine protein kinase -
Beggiatoa sp. PS
Length = 564
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 400 SWTPKSADRHRIDAFEMWCCGNGRCYEFHAYRTNASILRQLNIQIRLST 546
SWT K+A + + A W G G +H Y TN ++ L++ + ST
Sbjct: 75 SWTVKTAAQKILTALNRWLYGQG----YHLYGTNKGLVTTLSVLVMKST 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,702,457
Number of Sequences: 1657284
Number of extensions: 11618162
Number of successful extensions: 24885
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24859
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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