Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0855
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.66 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.66 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 484 CLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMA 600
           CL+L++     +++   L FI  N+KSEN  ++E  L A
Sbjct: 242 CLILITGKSIVQLLT-CLNFITNNLKSENEEFKEKLLAA 279


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 484 CLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMA 600
           CL+L++     +++   L FI  N+KSEN  ++E  L A
Sbjct: 242 CLILITGKSIVQLLT-CLNFITNNLKSENEEFKEKLLAA 279


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 472 PLTDSIPIHHQNHLVLLVFASRQVQGIEVPLL 377
           PLTD+IPIH   H  + +  +R +Q I  P++
Sbjct: 534 PLTDTIPIHVWIHPWIPLLDTR-LQAIIYPII 564


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 235 MKSDIDEISLQGIEFWSNV 291
           + S+I  +  + +EFW N+
Sbjct: 321 VSSEIYNVEYKNVEFWRNI 339


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 49  RANFEKENERNFIMEVVCEATQS 117
           R + +KE+ERN I+    + +QS
Sbjct: 381 RIDIDKEDERNEIISSALKLSQS 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,501
Number of Sequences: 336
Number of extensions: 3246
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)