Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0855
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0820 + 23437811-23440230,23440336-23440534 159 2e-39
05_03_0648 + 16563147-16565557,16565655-16565850 156 2e-38
03_02_0662 - 10250235-10250433,10250692-10253105 149 2e-36
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 46 4e-05
03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 35 0.081
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 33 0.19
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 31 0.76
11_06_0128 - 20389375-20389781,20389988-20392787 29 3.1
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 28 7.1
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 28 7.1
>12_02_0820 + 23437811-23440230,23440336-23440534
Length = 872
Score = 159 bits (386), Expect = 2e-39
Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 2/204 (0%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
VRLAAT+AL N+L F + NF + ER++IM VVCEATQS+D++I AA +CLV I S YY
Sbjct: 192 VRLAATRALYNALGFAQVNFSNDMERDYIMRVVCEATQSTDVKIRQAAFECLVAISSTYY 251
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
+ YM Q +F IT +A++ D + ++LQ IEFWS++
Sbjct: 252 DKLATYM-QDIFNITAKAVRGDEESVALQAIEFWSSICDEEIDILDEYSSEFTADSDV-- 308
Query: 361 TSRFYARGALQYLAPVLMQKLTKQ-DDSD-DELEWNPSKAASVCLMLLSNCCEDEIVPHV 534
++ + AL L P+L++ L KQ +D D DE WN + A CL L++ D+IVP V
Sbjct: 309 PCYYFIKQALPALVPMLLETLLKQEEDQDLDEGAWNLAMAGGTCLGLVARTVGDDIVPLV 368
Query: 535 LPFINCNIKSENWRYREAALMAFG 606
+PF+ NI +WR+REAA AFG
Sbjct: 369 MPFVEENITKPDWRHREAATYAFG 392
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMY-DSSIAVRDTAAWTFGRIXEIVPEAA 763
GSIL G A+ L PLV A+ ++ A+ D S V+DT AWT GRI E + +A
Sbjct: 392 GSILEGPSADKLAPLVNVALNFMLSALVNDPSNHVKDTTAWTLGRIFEFLHGSA 445
>05_03_0648 + 16563147-16565557,16565655-16565850
Length = 868
Score = 156 bits (378), Expect = 2e-38
Identities = 83/204 (40%), Positives = 117/204 (57%), Gaps = 2/204 (0%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
VRLAA +AL N+L+F +NF E ERN+IM+V+C+ S ++ I AA +CLV I S YY
Sbjct: 192 VRLAAVKALYNALDFAESNFANEMERNYIMKVICDTAVSKEVEIRQAAFECLVAIASTYY 251
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
H++PYM Q +F +T A+K D + ++LQ IEFWS + T
Sbjct: 252 VHLDPYM-QTIFNLTANAVKGDEEAVALQAIEFWSTICDEEIELQEEYEGSDDAN--STV 308
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELE--WNPSKAASVCLMLLSNCCEDEIVPHV 534
RF + AL L P+L++ L KQ++ D+ + WN S + CL L++ D IVP V
Sbjct: 309 NYRFIEK-ALPSLVPMLLETLLKQEEDQDQDDNVWNISMSGGTCLGLIARTVGDAIVPLV 367
Query: 535 LPFINCNIKSENWRYREAALMAFG 606
+PF+ NI +W REAA AFG
Sbjct: 368 MPFVEGNITKPDWHCREAATFAFG 391
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
GSIL G L PLV+ L+ D + VRDT AWT GR+ E++ A
Sbjct: 391 GSILEGPSVEKLAPLVQAGFDFLLNTTKDPNSQVRDTTAWTLGRVFELLHSPA 443
>03_02_0662 - 10250235-10250433,10250692-10253105
Length = 870
Score = 149 bits (362), Expect = 2e-36
Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 2/204 (0%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
VRLAA +AL N+L+F NF+ E ERN+IM+VVCE + I AA +CLV I S+YY
Sbjct: 192 VRLAAVKALYNALDFAETNFQNELERNYIMKVVCETAMCKEADIRKAAFECLVSIASIYY 251
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
+EPYM Q +F +T A + D + ++LQ +EFWS V G +
Sbjct: 252 DLLEPYM-QTIFELTSNAARVDEEPVALQAVEFWSTV---CDEEIARQEESKESGVFSSS 307
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELE--WNPSKAASVCLMLLSNCCEDEIVPHV 534
+ AL L P+L++ L KQ++ D+ + WN S + CL L++ +D IVP V
Sbjct: 308 CHFHFIEKALPSLVPMLLETLMKQEEDQDQDDGIWNISMSGGTCLGLVAITVQDAIVPLV 367
Query: 535 LPFINCNIKSENWRYREAALMAFG 606
+PFI NI +W REAA AFG
Sbjct: 368 MPFIEGNITKPDWHSREAATFAFG 391
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIV 751
GSIL G L PLV L+ A D + V+DT AWT RI E +
Sbjct: 391 GSILEGPSVQKLTPLVHAGFDFLLNATKDQNNHVKDTTAWTLSRIFEFL 439
>04_04_1693 +
35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Frame = +1
Query: 424 TKQDDSDDELE--WNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNI---KSENWRYREA 588
T +DD DD+ WN K ++ L +LSN D+I+P ++P I N+ + W+ REA
Sbjct: 373 TGEDDDDDDAVNVWNLRKCSAAGLDVLSNVFGDDILPTLMPLIQQNLARTDDDAWKEREA 432
Query: 589 ALMAFG 606
A+++ G
Sbjct: 433 AVLSIG 438
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +1
Query: 85 IMEVVCEA-TQSSDMRISVAAL-QCLVKILSLYY---QHMEPYMGQALFPITLEAMKSDI 249
+ ++VC A Q ++R S+ + Q L+ + L ++P++ + + + L+A K
Sbjct: 236 VRKLVCSAWVQLIEVRPSILEIFQLLISCVMLDLTLDSKLQPHL-KNVTELMLQANKDSD 294
Query: 250 DEISLQGIEFWS 285
DE++L+ EFWS
Sbjct: 295 DEVALEACEFWS 306
>03_02_0441 -
8517501-8517701,8518004-8518139,8519995-8520107,
8520189-8520284,8520376-8520590,8520675-8520797,
8520887-8520917,8521020-8521079,8521951-8522106,
8522185-8522274,8522347-8522562,8522671-8522805,
8522898-8523401,8523485-8523700,8524411-8524456,
8524542-8524678,8525059-8525191,8526084-8526358
Length = 960
Score = 34.7 bits (76), Expect = 0.081
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 388 LQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSE 567
LQ + P+L + T +D D +L + S A + M ++ + P VL F + + +
Sbjct: 295 LQVMCPLLTE--TADEDGDSDLAADRSAAEVIDTMAIN--LPRHVFPPVLEFASVSFRHI 350
Query: 568 NWRYREAALMAFG 606
N +YREAA+ + G
Sbjct: 351 NPKYREAAVTSLG 363
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 596 WHLGSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRI 739
W L +I G NT + A+P ++ + SS VR+ A W G +
Sbjct: 138 WALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNV 185
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 596 WHLGSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRI 739
W L +I G NT + A+P ++ + S VR+ A W G +
Sbjct: 144 WALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNV 191
>11_06_0128 - 20389375-20389781,20389988-20392787
Length = 1068
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 674 SKLAWHFPLMVSEC*LQDHQELNPNAIRAA---SLYRQFSLLMLQLINGNTCGTISSS 510
+KL+ P +S H +L+ N + A SL + SL+ L L N N GTI SS
Sbjct: 219 NKLSGEIPTALSNLSGLMHLDLDTNMLSGAIPSSLGKLSSLIWLNLANNNLSGTIPSS 276
>06_03_0927 + 26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 599 HLGSILGGLGANTLKPLVENAMP----TLIEAMYDSSIAVRDTAAWTFGRI 739
H G I+GG+ +NTL+P V ++ +L+E + + + R T GR+
Sbjct: 1051 HYGVIIGGIVSNTLRPAVPDSCDPEWRSLMEQCWSTEPSERPTFTEIAGRL 1101
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 596 WHLGSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRI 739
W L +I G ANT+ + A+P ++ + + R+ A W G +
Sbjct: 141 WALTNIASGTAANTMAVIEHGAVPIFVKLL----SSPREDAVWALGNV 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,386,783
Number of Sequences: 37544
Number of extensions: 316955
Number of successful extensions: 823
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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