Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0855
(763 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein. 296 6e-80
L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit pro... 296 6e-80
BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin) ... 296 6e-80
BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin) ... 296 6e-80
BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin) ... 296 6e-80
BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin) ... 296 6e-80
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 46 1e-04
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 46 1e-04
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 46 1e-04
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 46 1e-04
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 46 1e-04
BC018314-1|AAH18314.1| 771|Homo sapiens Unknown (protein for IM... 46 1e-04
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 46 1e-04
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 46 1e-04
AF019039-1|AAB83973.1| 896|Homo sapiens transportin2 protein. 44 5e-04
>L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein.
Length = 876
Score = 296 bits (726), Expect = 6e-80
Identities = 138/202 (68%), Positives = 164/202 (81%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
V+LAAT ALLNSLEFT+ANF+KE+ER+FIM+VVCEATQ D R+ VAALQ LVKI+SLYY
Sbjct: 190 VKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY 249
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
Q+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV GRPP
Sbjct: 250 QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLP 540
TS+FYA+GALQYL P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLP
Sbjct: 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLP 369
Query: 541 FINCNIKSENWRYREAALMAFG 606
FI +IK+ +WRYR+AA+MAFG
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFG 391
Score = 70.5 bits (165), Expect = 6e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
G IL G + LKPLV AMPTLIE M D S+ VRDTAAWT GRI E++PEAA
Sbjct: 391 GCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443
>L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit
protein.
Length = 876
Score = 296 bits (726), Expect = 6e-80
Identities = 138/202 (68%), Positives = 164/202 (81%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
V+LAAT ALLNSLEFT+ANF+KE+ER+FIM+VVCEATQ D R+ VAALQ LVKI+SLYY
Sbjct: 190 VKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY 249
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
Q+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV GRPP
Sbjct: 250 QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLP 540
TS+FYA+GALQYL P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLP
Sbjct: 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLP 369
Query: 541 FINCNIKSENWRYREAALMAFG 606
FI +IK+ +WRYR+AA+MAFG
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFG 391
Score = 70.5 bits (165), Expect = 6e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
G IL G + LKPLV AMPTLIE M D S+ VRDTAAWT GRI E++PEAA
Sbjct: 391 GCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443
>BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 296 bits (726), Expect = 6e-80
Identities = 138/202 (68%), Positives = 164/202 (81%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
V+LAAT ALLNSLEFT+ANF+KE+ER+FIM+VVCEATQ D R+ VAALQ LVKI+SLYY
Sbjct: 190 VKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY 249
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
Q+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV GRPP
Sbjct: 250 QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLP 540
TS+FYA+GALQYL P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLP
Sbjct: 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLP 369
Query: 541 FINCNIKSENWRYREAALMAFG 606
FI +IK+ +WRYR+AA+MAFG
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFG 391
Score = 70.5 bits (165), Expect = 6e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
G IL G + LKPLV AMPTLIE M D S+ VRDTAAWT GRI E++PEAA
Sbjct: 391 GCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443
>BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 296 bits (726), Expect = 6e-80
Identities = 138/202 (68%), Positives = 164/202 (81%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
V+LAAT ALLNSLEFT+ANF+KE+ER+FIM+VVCEATQ D R+ VAALQ LVKI+SLYY
Sbjct: 190 VKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY 249
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
Q+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV GRPP
Sbjct: 250 QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLP 540
TS+FYA+GALQYL P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLP
Sbjct: 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLP 369
Query: 541 FINCNIKSENWRYREAALMAFG 606
FI +IK+ +WRYR+AA+MAFG
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFG 391
Score = 70.5 bits (165), Expect = 6e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
G IL G + LKPLV AMPTLIE M D S+ VRDTAAWT GRI E++PEAA
Sbjct: 391 GCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443
>BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 296 bits (726), Expect = 6e-80
Identities = 138/202 (68%), Positives = 164/202 (81%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
V+LAAT ALLNSLEFT+ANF+KE+ER+FIM+VVCEATQ D R+ VAALQ LVKI+SLYY
Sbjct: 190 VKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY 249
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
Q+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV GRPP
Sbjct: 250 QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLP 540
TS+FYA+GALQYL P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLP
Sbjct: 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLP 369
Query: 541 FINCNIKSENWRYREAALMAFG 606
FI +IK+ +WRYR+AA+MAFG
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFG 391
Score = 70.5 bits (165), Expect = 6e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
G IL G + LKPLV AMPTLIE M D S+ VRDTAAWT GRI E++PEAA
Sbjct: 391 GCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443
>BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 296 bits (726), Expect = 6e-80
Identities = 138/202 (68%), Positives = 164/202 (81%)
Frame = +1
Query: 1 VRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYY 180
V+LAAT ALLNSLEFT+ANF+KE+ER+FIM+VVCEATQ D R+ VAALQ LVKI+SLYY
Sbjct: 190 VKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY 249
Query: 181 QHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXXXXXXXXXGRPPTR 360
Q+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV GRPP
Sbjct: 250 QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309
Query: 361 TSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLP 540
TS+FYA+GALQYL P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLP
Sbjct: 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLP 369
Query: 541 FINCNIKSENWRYREAALMAFG 606
FI +IK+ +WRYR+AA+MAFG
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFG 391
Score = 70.5 bits (165), Expect = 6e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 605 GSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRIXEIVPEAA 763
G IL G + LKPLV AMPTLIE M D S+ VRDTAAWT GRI E++PEAA
Sbjct: 391 GCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 433 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFG 606
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLG 422
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 433 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFG 606
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLG 422
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 433 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFG 606
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLG 422
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 433 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFG 606
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLG 422
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 427 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 603
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 418
Query: 604 G 606
G
Sbjct: 419 G 419
>BC018314-1|AAH18314.1| 771|Homo sapiens Unknown (protein for
IMAGE:4154236) protein.
Length = 771
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 427 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 603
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 418
Query: 604 G 606
G
Sbjct: 419 G 419
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 427 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 603
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 418
Query: 604 G 606
G
Sbjct: 419 G 419
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 427 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 603
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 523 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 582
Query: 604 G 606
G
Sbjct: 583 G 583
>AF019039-1|AAB83973.1| 896|Homo sapiens transportin2 protein.
Length = 896
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 427 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 603
+ DD DD L +WN K ++ L +L+N +E++PH+LP+ + E W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPYQSLLFHPE-WVVKESGILVL 417
Query: 604 G 606
G
Sbjct: 418 G 418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,774,292
Number of Sequences: 237096
Number of extensions: 1793099
Number of successful extensions: 3293
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3287
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -