Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0853
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.2  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   6.9  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   6.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.1  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 18  TFP*S*PLGNLVQWFPVAFCTRPNYP 95
           TFP S PL  +    P  FC   N P
Sbjct: 534 TFPPSPPLSQIHDLSPDQFCNGDNRP 559


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 357 LLRVHNLFIICIKYNKKHIFSLATFF 434
           +  VH LF++CI Y    +F L   +
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLLCIY 147



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 366 VHNLFIICIKYNKKHIFSLATFF 434
           +H LF++C+ Y   H+  L   +
Sbjct: 191 MHLLFLLCLDYFTLHLLFLPCIY 213


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 291 SVDIH*ILQNERVF*EYDLIMIKE 220
           +VDI  IL N+R+F  Y   ++K+
Sbjct: 27  NVDIDAILHNKRLFDNYLQCLLKK 50


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 291 SVDIH*ILQNERVF*EYDLIMIKE 220
           +VDI  IL N+R+F  Y   ++K+
Sbjct: 27  NVDIDAILHNKRLFDNYLQCLLKK 50


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 366 VHNLFIICIKYNKKH 410
           V   FII I++N KH
Sbjct: 333 VTTFFIIIIQFNNKH 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,926
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)