BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0852 (748 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 50 6e-05 UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 34 3.2 UniRef50_Q64N94 Cluster: Putative transcriptional regulator; n=2... 34 4.3 UniRef50_A6G5Z1 Cluster: Peptidase, S1 (Chymotrypsin) family pro... 33 7.5 >UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth) Length = 191 Score = 50.0 bits (114), Expect = 6e-05 Identities = 22/28 (78%), Positives = 23/28 (82%) Frame = -3 Query: 716 KFYYRSFLLLRWVDELTAPLVLSGYWSP 633 +F FLLLRWVDELTA LVLSGYWSP Sbjct: 148 RFCLSRFLLLRWVDELTAHLVLSGYWSP 175 >UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth) Length = 782 Score = 34.3 bits (75), Expect = 3.2 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -3 Query: 506 AERWYLPVRTHKRSYRQ 456 AE WYLP RTHKRSY + Sbjct: 569 AEWWYLPARTHKRSYHR 585 >UniRef50_Q64N94 Cluster: Putative transcriptional regulator; n=2; Bacteroides fragilis|Rep: Putative transcriptional regulator - Bacteroides fragilis Length = 278 Score = 33.9 bits (74), Expect = 4.3 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = +1 Query: 166 KRSHISRRCLSVTTGFPDSDLILRLNFDLLSQ 261 K ++S +CL +T FPD D++ +LN + L+Q Sbjct: 10 KSLYLSTQCLLITISFPDMDIVDKLNREFLTQ 41 >UniRef50_A6G5Z1 Cluster: Peptidase, S1 (Chymotrypsin) family protein; n=2; Plesiocystis pacifica SIR-1|Rep: Peptidase, S1 (Chymotrypsin) family protein - Plesiocystis pacifica SIR-1 Length = 465 Score = 33.1 bits (72), Expect = 7.5 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +1 Query: 535 FGLKGGTAFVTIPTETLEFLSQGGWRIYVVDVYGLQ 642 FG GG AFV +PTE + G WR++ + YG Q Sbjct: 192 FGDSGGPAFVKLPTEA---GADGSWRVFGIVSYGSQ 224 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 725,191,714 Number of Sequences: 1657284 Number of extensions: 14503278 Number of successful extensions: 28702 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 27887 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 28700 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 61323318355 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -