Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0852
         (748 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   6e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    34   3.2  
UniRef50_Q64N94 Cluster: Putative transcriptional regulator; n=2...    34   4.3  
UniRef50_A6G5Z1 Cluster: Peptidase, S1 (Chymotrypsin) family pro...    33   7.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 22/28 (78%), Positives = 23/28 (82%)
 Frame = -3

Query: 716 KFYYRSFLLLRWVDELTAPLVLSGYWSP 633
           +F    FLLLRWVDELTA LVLSGYWSP
Sbjct: 148 RFCLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 506 AERWYLPVRTHKRSYRQ 456
           AE WYLP RTHKRSY +
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q64N94 Cluster: Putative transcriptional regulator; n=2;
           Bacteroides fragilis|Rep: Putative transcriptional
           regulator - Bacteroides fragilis
          Length = 278

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +1

Query: 166 KRSHISRRCLSVTTGFPDSDLILRLNFDLLSQ 261
           K  ++S +CL +T  FPD D++ +LN + L+Q
Sbjct: 10  KSLYLSTQCLLITISFPDMDIVDKLNREFLTQ 41


>UniRef50_A6G5Z1 Cluster: Peptidase, S1 (Chymotrypsin) family
           protein; n=2; Plesiocystis pacifica SIR-1|Rep:
           Peptidase, S1 (Chymotrypsin) family protein -
           Plesiocystis pacifica SIR-1
          Length = 465

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 535 FGLKGGTAFVTIPTETLEFLSQGGWRIYVVDVYGLQ 642
           FG  GG AFV +PTE     + G WR++ +  YG Q
Sbjct: 192 FGDSGGPAFVKLPTEA---GADGSWRVFGIVSYGSQ 224


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,191,714
Number of Sequences: 1657284
Number of extensions: 14503278
Number of successful extensions: 28702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28700
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)