Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0851
         (583 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0022 + 151233-151515,152632-152852,153579-153656,154558-15...    29   2.7  
03_05_0431 + 24221881-24224586                                         29   3.6  
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916...    27   8.2  
01_06_0225 - 27675363-27675464,27675727-27675823,27676145-276762...    27   8.2  

>11_01_0022 +
           151233-151515,152632-152852,153579-153656,154558-154674,
           155970-156316,156504-157032
          Length = 524

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 339 NLKGFQVGAGCVSEHYACIR 280
           N   +QVG GC+S+ Y C+R
Sbjct: 348 NATNYQVGTGCLSDIYFCLR 367


>03_05_0431 + 24221881-24224586
          Length = 901

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 176 ARSRTVFIWG-RNVIPLSRVTPRYLTFETHGMG 81
           AR+RTVF WG  +V  +  + PR + F++ G G
Sbjct: 175 ARNRTVFCWGDESVSGVIGLAPRNVRFQSIGAG 207


>10_05_0101 -
           9167383-9167679,9167883-9167961,9168161-9168326,
           9169201-9169299,9169969-9171361
          Length = 677

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 249 SLQNLYTPRHDVCKRSVRSR 308
           ++QNLY PR D+C+ S  S+
Sbjct: 5   TIQNLYAPRADLCEPSCSSK 24


>01_06_0225 -
           27675363-27675464,27675727-27675823,27676145-27676218,
           27677361-27677444,27677728-27678489,27679515-27679565
          Length = 389

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 84  GLAKESDGTNGGGVCAPTTEWDAR 13
           G +K  DG NGG + AP  E D++
Sbjct: 120 GESKPGDGGNGGSISAPQDESDSK 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,019,601
Number of Sequences: 37544
Number of extensions: 371481
Number of successful extensions: 883
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)