BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0851 (583 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 36 0.079 CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 36 0.079 BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 36 0.079 BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 36 0.079 >L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha protein. Length = 598 Score = 36.3 bits (80), Expect = 0.079 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +3 Query: 234 PQ*GNSLQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 344 P G+ + + TP + KRSV +RSPHQL PS +S Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152 >CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. Length = 598 Score = 36.3 bits (80), Expect = 0.079 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +3 Query: 234 PQ*GNSLQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 344 P G+ + + TP + KRSV +RSPHQL PS +S Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152 >BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed), alpha 2 (70kD subunit) protein. Length = 598 Score = 36.3 bits (80), Expect = 0.079 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +3 Query: 234 PQ*GNSLQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 344 P G+ + + TP + KRSV +RSPHQL PS +S Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152 >BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed), alpha 2 (70kD subunit) protein. Length = 598 Score = 36.3 bits (80), Expect = 0.079 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +3 Query: 234 PQ*GNSLQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 344 P G+ + + TP + KRSV +RSPHQL PS +S Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 86,682,861 Number of Sequences: 237096 Number of extensions: 1867582 Number of successful extensions: 4339 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4339 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 6042162242 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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