Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0850
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   0.82 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   4.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.7  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 458 AGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTK 348
           +GF     T    D  N++TF    F+ V++  +L K
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 457 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 558
           AD  KLV GL    +S  +    N + G  IVAG
Sbjct: 255 ADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAG 288


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 102 VREQDGADLRQGSFLRLWTRF 164
           +++Q G    +G F++LW  F
Sbjct: 382 MQDQKGWGRSEGDFIKLWDMF 402


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 20  WRCYTRDPMMMKLPLVSRAVILK 88
           ++ Y +DP+ +   LVS  ++LK
Sbjct: 71  FKAYIKDPLTLAQGLVSTEMLLK 93


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 421 PVVRVAVEPKNPADLPKLV 477
           PV+R+ V   NP D   L+
Sbjct: 480 PVMRICVSAWNPKDCDPLI 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,137
Number of Sequences: 336
Number of extensions: 3525
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)