Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0850
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 365 e-102
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 365 e-102
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 140 7e-34
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 140 7e-34
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 33 0.15
Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical pr... 33 0.20
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.2
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 28 4.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.6
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 5.6
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 5.6
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 5.6
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 5.6
Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81462-2|CAB03841.1| 263|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 7.4
AC084197-35|AAN63424.1| 505|Caenorhabditis elegans Puf (pumilio... 27 7.4
Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL034488-6|CAA22450.2| 467|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 365 bits (899), Expect = e-102
Identities = 169/193 (87%), Positives = 181/193 (93%)
Frame = +1
Query: 4 AQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 183
AQKYRMEMLYEGPHDDEAA+ IK+CDP PLMMY+SKMVPTSDKGRFYAFGRVFSGKV T
Sbjct: 358 AQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVAT 417
Query: 184 GQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 363
G KARI GPN+ PGKKEDLYEKTIQRTILMMGR++E IED+PSGNI GLVGVDQ+LVK G
Sbjct: 418 GMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGG 477
Query: 364 TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGE 543
TITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGE
Sbjct: 478 TITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGE 537
Query: 544 HIVAGAGELHLEI 582
HI+AGAGELHLEI
Sbjct: 538 HIIAGAGELHLEI 550
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 365 bits (899), Expect = e-102
Identities = 169/193 (87%), Positives = 181/193 (93%)
Frame = +1
Query: 4 AQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 183
AQKYRMEMLYEGPHDDEAA+ IK+CDP PLMMY+SKMVPTSDKGRFYAFGRVFSGKV T
Sbjct: 358 AQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVAT 417
Query: 184 GQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 363
G KARI GPN+ PGKKEDLYEKTIQRTILMMGR++E IED+PSGNI GLVGVDQ+LVK G
Sbjct: 418 GMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGG 477
Query: 364 TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGE 543
TITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGE
Sbjct: 478 TITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGE 537
Query: 544 HIVAGAGELHLEI 582
HI+AGAGELHLEI
Sbjct: 538 HIIAGAGELHLEI 550
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 140 bits (339), Expect = 7e-34
Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Frame = +1
Query: 10 KYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQ 189
K ++E Y GP D + A ++ C+ E PLM++ +K P D +F+ FGRV SG +
Sbjct: 450 KTKIEQTYLGPADSQLAQEMQKCNAEGPLMVHTTKNYPVDDATQFHVFGRVMSGTLEANT 509
Query: 190 KARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTI 369
R++G N++ +ED T+ R + + Y + VP+G + G+DQ +VKT TI
Sbjct: 510 DVRVLGENYSIQDEEDCRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGIDQPIVKTATI 569
Query: 370 TTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESG 540
++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++ EESG
Sbjct: 570 AELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESG 629
Query: 541 EHIVAGAGELHLE 579
EH++ G GE +++
Sbjct: 630 EHVLLGTGEFYMD 642
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 140 bits (339), Expect = 7e-34
Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Frame = +1
Query: 10 KYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQ 189
K ++E Y GP D + A ++ C+ E PLM++ +K P D +F+ FGRV SG +
Sbjct: 325 KTKIEQTYLGPADSQLAQEMQKCNAEGPLMVHTTKNYPVDDATQFHVFGRVMSGTLEANT 384
Query: 190 KARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTI 369
R++G N++ +ED T+ R + + Y + VP+G + G+DQ +VKT TI
Sbjct: 385 DVRVLGENYSIQDEEDCRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGIDQPIVKTATI 444
Query: 370 TTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESG 540
++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++ EESG
Sbjct: 445 AELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESG 504
Query: 541 EHIVAGAGELHLE 579
EH++ G GE +++
Sbjct: 505 EHVLLGTGEFYMD 517
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 60.5 bits (140), Expect = 9e-10
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Frame = +1
Query: 67 IKSCDPEAPLMMYVSKMVPTSDKGRFY--AFGRVFSGKVVTGQKARIMGPNFTPGKKEDL 240
+ C+PEA +++V K++ T DK A RV SG + G ++ ++
Sbjct: 361 VLECNPEAMTLVFVVKLLQTEDKNLTSRRAICRVLSGTLRKGDTLYVLQQQ---NNSSEV 417
Query: 241 YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVS 420
I R ++ GR + V SG IC + + L++ T+ + +K+ +
Sbjct: 418 TSTKIDRISILRGRDSIPTDTVTSGMICTIDA--EILLQNTTLCEKPDFPCLKIGSQTGE 475
Query: 421 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLE 579
+VRV++ + D+ L E LK LA D ++ + E+GE + AGE+HL+
Sbjct: 476 ALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQ 528
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 60.5 bits (140), Expect = 9e-10
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Frame = +1
Query: 67 IKSCDPEAPLMMYVSKMVPTSDKGRFY--AFGRVFSGKVVTGQKARIMGPNFTPGKKEDL 240
+ C+PEA +++V K++ T DK A RV SG + G ++ ++
Sbjct: 361 VLECNPEAMTLVFVVKLLQTEDKNLTSRRAICRVLSGTLRKGDTLYVLQQQ---NNSSEV 417
Query: 241 YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVS 420
I R ++ GR + V SG IC + + L++ T+ + +K+ +
Sbjct: 418 TSTKIDRISILRGRDSIPTDTVTSGMICTIDA--EILLQNTTLCEKPDFPCLKIGSQTGE 475
Query: 421 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLE 579
+VRV++ + D+ L E LK LA D ++ + E+GE + AGE+HL+
Sbjct: 476 ALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQ 528
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = +1
Query: 253 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKN-AHNMKVMKFSVSPVV 429
+QR + M +E I +G+IC G+D +T +T +N A + + M PV+
Sbjct: 392 VQRLVRMHAADMEEITTAYAGDICATFGLDCHSGET--FSTDQNLAPHCESMHIP-EPVI 448
Query: 430 RVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEI 582
+A++P N D ++ L R K DP + N+E+ E IV+G GELHLEI
Sbjct: 449 SMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEI 500
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 439 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLE 579
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE 446
>Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical
protein F01D5.5 protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.20
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = -1
Query: 413 LNFITFMLWAFLKVVMVPVLTKN*STPTRPQMLPEGTSSIASTXXXXXXXXXXXVFSYKS 234
L F+T A + V L +N +T T + +S+ S+ S K+
Sbjct: 7 LIFVTLFALALCQEDYVEELAENTTTTTEGSTVSSDSSTAGSSEAPCQDDPSTDCASLKN 66
Query: 233 SFFPGVKFGPMMRAFCPVT--TLPEKTRPK 150
K+ PM++AFCPVT P T P+
Sbjct: 67 -LCTNSKYTPMLKAFCPVTCNMCPGATTPE 95
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 385 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 507
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 518 CTMGSDLARRLRPSTSLGRS 459
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 482 PSTSLGRSAGFLGSTATRTTGDTLN 408
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 277 GRYVEAIEDVPSGN-ICGLVGV 339
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 277 GRYVEAIEDVPSGN-ICGLVGV 339
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 5.6
Identities = 24/94 (25%), Positives = 39/94 (41%)
Frame = -1
Query: 566 SPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLW 387
SP P + P ++ T GS ++ ST+ S L S+ T + +
Sbjct: 1348 SPVPTSSPIPSTTFASSTSGSTISDVSSVSTT---SLAPLSSSLPSTVPSSTQSFSSTSE 1404
Query: 386 AFLKVVMVPVLTKN*STPTRPQMLPEGTSSIAST 285
K PV ++ STPT P E ++ ++ST
Sbjct: 1405 GSSKASSSPVPSQTSSTPTNPTGSTESSTLLSST 1438
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 567 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 457
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 572 WSSPAPATMCSPDSSLIHCT 513
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 567 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 457
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 572 WSSPAPATMCSPDSSLIHCT 513
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical
protein F32A7.4 protein.
Length = 529
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +1
Query: 280 RYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPA 459
R++ IE +G GL+ FL+ GT+ ++ +SP V VE N +
Sbjct: 314 RFLILIESSQTGAFGGLLEARDFLLTQGTLVDYRKLLKSLEEAVMLSPKVVRIVEDYNLS 373
Query: 460 DLPK 471
D K
Sbjct: 374 DYEK 377
>Z81462-2|CAB03841.1| 263|Caenorhabditis elegans Hypothetical
protein C04H5.2 protein.
Length = 263
Score = 27.5 bits (58), Expect = 7.4
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +3
Query: 318 HLWSRWSRSVLSQDWYHHHFQECPQ 392
+LW+ W++ S +W+ + ++C Q
Sbjct: 188 YLWTTWAQGEPSANWWEYDIEDCLQ 212
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
protein F54B3.1b protein.
Length = 3394
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 VPSGNI-CGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 480
VP+G +VG +QF+V T T+ + + V +SP V +A + N + +++
Sbjct: 7 VPAGGDGTEVVGDEQFIVTVRTKCTYISRYYRIVFVLDLSPSVVMADDESNCCLVDRIIP 66
Query: 481 GLKRLAKS 504
L+ +S
Sbjct: 67 SLRNALRS 74
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
protein F54B3.1a protein.
Length = 3396
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 VPSGNI-CGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 480
VP+G +VG +QF+V T T+ + + V +SP V +A + N + +++
Sbjct: 7 VPAGGDGTEVVGDEQFIVTVRTKCTYISRYYRIVFVLDLSPSVVMADDESNCCLVDRIIP 66
Query: 481 GLKRLAKS 504
L+ +S
Sbjct: 67 SLRNALRS 74
>AC084197-35|AAN63424.1| 505|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 11 protein.
Length = 505
Score = 27.5 bits (58), Expect = 7.4
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -3
Query: 459 SRVFGLNSDTHDW*YTEFHHLHVVGILESGDGTSLD*ELIDSNETTDVTRGHILNSFNIT 280
S V L+SDT Y E + VV + G + + + SNE + H++ +
Sbjct: 315 STVETLSSDT----YAECYQQRVVLLRSLMSGVTRNCSQLASNEFANYVVQHVIKCGDAM 370
Query: 279 SHHKDCTLDSLLIQ-VLFLSRCKVWSH 202
+ ++D ++ L+Q +L +S+ K SH
Sbjct: 371 AVYRDVIIEQCLLQNLLSMSQEKYASH 397
>Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical
protein F52G2.3 protein.
Length = 651
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 169 QRKRVQRRRNDPCRRSAPSCSRTSSVGLQDHSS*YQWQLHHHGVPRITSPYDIS 8
Q+KR Q+ +R A S + + Q HS Q +H P ++S IS
Sbjct: 535 QKKRAQQEHFAQQQRPAGSSNSYQTENAQQHSMSNNMQYYHSQAPPVSSRSSIS 588
>AL034488-6|CAA22450.2| 467|Caenorhabditis elegans Hypothetical
protein Y54G11A.7 protein.
Length = 467
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 210 WSHDASFLSGNNLARENASKGV 145
+SHDA F +GN + ++NA + V
Sbjct: 147 FSHDAHFFNGNQIGKKNAIEKV 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,786,321
Number of Sequences: 27780
Number of extensions: 324312
Number of successful extensions: 971
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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