Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0849
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   1.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   2.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   2.0  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    21   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   7.9  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 316 DRVEATASPFTASWATQT 369
           +R+E T   FTASW+  T
Sbjct: 6   ERLENTWRAFTASWSPDT 23


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 298 RRRPDNIEQNPHVPNLRDPC 239
           + RP       H  NL+DPC
Sbjct: 252 KMRPKRQSSRRHRKNLKDPC 271


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 14/52 (26%), Positives = 19/52 (36%)
 Frame = -3

Query: 394 DDRSSIFTGSGLPSSR*KDSLLPRRDPMHTARRRRPDNIEQNPHVPNLRDPC 239
           D+R  +  G+  PS+R    L+ RR   HT       N    P        C
Sbjct: 253 DNRLLVLAGTSSPSNRFTRHLIQRR--THTRHTTTSHNTRGTPRTTPASSRC 302


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 270 TRMFLIYVILAFAQI 226
           +RMFLI V++AF  +
Sbjct: 2   SRMFLIVVLIAFVGV 16


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +3

Query: 219 FRVSAQMQGSRRLGTC 266
           ++++    G+ R+GTC
Sbjct: 484 YKITVNNSGNNRMGTC 499


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 357 GNPDPVKIEERSSD 398
           G+PD +K+E   SD
Sbjct: 286 GSPDVIKVEPELSD 299


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 235 CADTRNILIKTKNSEIYLSVGLNR 164
           C   RN++  ++N+  ++   LNR
Sbjct: 794 CYIDRNVVFSSQNNTNWVPTSLNR 817


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 222 RVSAQMQGSRRLGTCGFCSMLSGLLRRA 305
           RVSAQM+   R      C   + ++RRA
Sbjct: 159 RVSAQMKADLRSHFRALCQDDTPMVRRA 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,552
Number of Sequences: 336
Number of extensions: 2087
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)