Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0849
         (402 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804...    31   0.26 
04_03_0204 + 12643435-12644001                                         27   4.2  
08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822...    27   5.6  
09_06_0096 - 20840855-20841994                                         27   7.3  
03_05_0120 - 21011955-21012002,21012211-21012578,21012650-21012752     26   9.7  

>01_05_0491 -
           22680011-22680125,22680210-22680307,22680392-22680472,
           22680564-22680677,22680757-22680823,22680947-22681017,
           22681099-22681236,22681324-22681530,22681630-22681773,
           22681856-22682017,22682117-22682173,22682256-22682348,
           22682425-22682542,22682678-22682817,22683031-22683590,
           22683703-22683805
          Length = 755

 Score = 31.5 bits (68), Expect = 0.26
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 295 RRPDNIEQNPHVPNLRDPCICADTRNILIKTKNSEIYLSVGLNRPIPASFLYKLYV 128
           R  D  E N  +P L DP      + +LIK  + ++  S+G  RPI A  +Y+  +
Sbjct: 333 RGVDIHENNSQLPGLNDPEAEKQQQELLIKCISEDLGFSIG--RPIAAYLIYRCLI 386


>04_03_0204 + 12643435-12644001
          Length = 188

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 333 CCLDAILCIPRAEEDRITS 277
           CCL A+LC+PRA    + +
Sbjct: 6   CCLVAVLCLPRASASPVAA 24


>08_01_0841 +
           8223768-8223871,8227749-8228745,8228779-8228828,
           8228896-8230396
          Length = 883

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 387 VLRFSLGLGCPARGKRTRCCLDAILCIPRAEED 289
           +LR S         +R RCC+D+ L +P+  E+
Sbjct: 635 LLRASRRTEDSCHNRRNRCCIDSALTVPKGIEN 667


>09_06_0096 - 20840855-20841994
          Length = 379

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3

Query: 328 PRRDPMHTARRRRP 287
           PRRDP+   RRRRP
Sbjct: 300 PRRDPVPVVRRRRP 313


>03_05_0120 - 21011955-21012002,21012211-21012578,21012650-21012752
          Length = 172

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 134 ICQVTWLRGILQNLFMS 84
           + ++TW +G+LQ LF S
Sbjct: 155 VAKITWFKGVLQGLFPS 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,489,012
Number of Sequences: 37544
Number of extensions: 228586
Number of successful extensions: 527
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)