Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0847
         (468 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    40   0.021
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   0.77 
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    33   2.4  
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   2.4  
UniRef50_Q7S239 Cluster: Putative uncharacterized protein NCU098...    33   3.1  
UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1; ...    33   3.1  
UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q6Z4I5 Cluster: DNA binding protein-like; n=4; Oryza sa...    31   9.5  
UniRef50_Q4R7K9 Cluster: Testis cDNA, clone: QtsA-14980, similar...    31   9.5  
UniRef50_Q4D940 Cluster: Signal recognition particle protein, pu...    31   9.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 40.3 bits (90), Expect = 0.021
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 399 RCVDELTAHLVLSGYWSP 346
           R VDELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 0.77
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 214 WYLPVRTHKRSYHQ 173
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 133 SKNQTRKIIISVITGGRTSCESARVGTTAPPISAVK 240
           SKN+ +K  + ++T G T C SA VGTT   +   K
Sbjct: 317 SKNKIKKKEVDLVTNGETVCGSANVGTTVEILETEK 352


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 427 RGGARYPIRPIVSR 468
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_Q7S239 Cluster: Putative uncharacterized protein
           NCU09875.1; n=2; Sordariales|Rep: Putative
           uncharacterized protein NCU09875.1 - Neurospora crassa
          Length = 520

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = +1

Query: 55  GTNFSNEIRTQQMFTIDFHGEGITSCSKNQTRKIIISVITGGRTSCESARVGTTAP 222
           G + +  I T     +DFH E +TSC++N  RKIII  +T G    E   +G  AP
Sbjct: 91  GRDVTVVIPTVDPLGVDFH-ECLTSCARNGPRKIII--VTAGEDLYEKT-LGAVAP 142


>UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 400

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -2

Query: 347 HRHLQRKCATHLEI*VL--RSQYSHNGCPTLQTETHYCFTAEIGGAVVPTRADSQEVLPP 174
           H H  R C+T + +      S +S +G PT+Q +T    T        P  AD Q+  P 
Sbjct: 20  HHHGLRACSTCIRLTEAPDESAFSVHG-PTMQPQTASALTEIPTSTTKPAAADQQDKPPV 78

Query: 173 VITEIII 153
           VITE+ +
Sbjct: 79  VITEMAV 85


>UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 353

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 408 KKKKKNSRGGPVPNS 452
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>UniRef50_Q6Z4I5 Cluster: DNA binding protein-like; n=4; Oryza
           sativa|Rep: DNA binding protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 544

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 52  AGTNFSNEIRTQQMFTIDFHGEGITSC-SKNQTRKIIISVITGGRTSCESARVGTTAPPI 228
           +GT+   +    ++  +D  G GIT+C  +N+ +K   S++ G      + RV      +
Sbjct: 29  SGTSKRRDFTALELILVDEEGVGITACVGENEIQKFSTSIVEGHAYFLRNFRVSRQTKKL 88

Query: 229 SAV 237
           +AV
Sbjct: 89  NAV 91


>UniRef50_Q4R7K9 Cluster: Testis cDNA, clone: QtsA-14980, similar to
           human mitochondrial ribosomal protein S31 (MRPS31),
           nucleargene encoding mitochondrial protein,; n=6;
           Eutheria|Rep: Testis cDNA, clone: QtsA-14980, similar to
           human mitochondrial ribosomal protein S31 (MRPS31),
           nucleargene encoding mitochondrial protein, - Macaca
           fascicularis (Crab eating macaque) (Cynomolgus monkey)
          Length = 344

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +1

Query: 4   VRCIRIERCSGVRIPQAGTNFSNEIRTQQMFTIDFHGEGITSCSKNQTRKIIISVITGGR 183
           VR   I+RC G             +RT +  T     E   S  +N T+K ++ +I G +
Sbjct: 41  VRMKNIQRCFGTNSVICSKKDEQSVRTDE--TSKETSESQASAKEN-TKKDLLDIIKGMK 97

Query: 184 TSCESARVGTTAPP 225
               +  V TT PP
Sbjct: 98  VELSTVNVQTTKPP 111


>UniRef50_Q4D940 Cluster: Signal recognition particle protein,
           putative; n=2; Trypanosoma|Rep: Signal recognition
           particle protein, putative - Trypanosoma cruzi
          Length = 763

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 422 FFFFFYCL-DVWTSSQPTWC*VVTGAHRHLQRKCATHL 312
           FFFFF C+ D    S   W  V +   RHL+R+  T +
Sbjct: 10  FFFFFLCVCDCVPLSDSLWLAVCSNVVRHLERRVCTRM 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,207,634
Number of Sequences: 1657284
Number of extensions: 9817092
Number of successful extensions: 18890
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18886
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)