Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0847
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 239 SSNAFRFEGWGSRCDYTETLELISQGVWRI 328
           + N+ ++ G      Y E +EL  +G W++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 425 VFFFFFYCLDVWTSSQ 378
           +F +   C+++W SS+
Sbjct: 220 IFTYTSICIEIWQSSE 235


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 361 WLLEPIDIYNVNAPHTLRYK 302
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,521
Number of Sequences: 336
Number of extensions: 2606
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)