Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0845
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.6  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 331 KEHLPQALHGRC 366
           K HLP ALH  C
Sbjct: 64  KRHLPDALHTEC 75


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 477 RSQPAKLHLRPEVQM*RMFPRAILCFTNSFS 385
           R    KLHL+      ++ P  +LC+  S+S
Sbjct: 502 RKPTKKLHLKNSPISKKVRPPQVLCYITSWS 532


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/36 (19%), Positives = 18/36 (50%)
 Frame = +1

Query: 13  SRSLRTDYIKAARARRSRSPQVRASVFHSLHQHYRD 120
           +R  R +  +  + ++ +  ++      S+HQH+ D
Sbjct: 75  ARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 110


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 200 PDPRSCANRVRHSTYRDARGVLHSYF 277
           PD       ++H+   D RG+LH  F
Sbjct: 613 PDQNVKKINLKHALDLDRRGLLHRQF 638


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/36 (19%), Positives = 18/36 (50%)
 Frame = +1

Query: 13  SRSLRTDYIKAARARRSRSPQVRASVFHSLHQHYRD 120
           +R  R +  +  + ++ +  ++      S+HQH+ D
Sbjct: 226 ARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 261


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/36 (19%), Positives = 18/36 (50%)
 Frame = +1

Query: 13  SRSLRTDYIKAARARRSRSPQVRASVFHSLHQHYRD 120
           +R  R +  +  + ++ +  ++      S+HQH+ D
Sbjct: 285 ARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,309
Number of Sequences: 336
Number of extensions: 3705
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)