BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0845 (637 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 33 0.19 SB_27216| Best HMM Match : Lectin_C (HMM E-Value=1.9) 31 0.59 SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) 31 0.78 SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12) 29 2.4 SB_21510| Best HMM Match : zf-C2H2 (HMM E-Value=6.3e-07) 29 2.4 SB_9786| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.2 SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.2 SB_4382| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.2 SB_14469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5 SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_38264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0) 28 7.3 SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.3 SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7 >SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2516 Score = 39.5 bits (88), Expect = 0.002 Identities = 24/57 (42%), Positives = 31/57 (54%) Frame = +2 Query: 272 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWT 442 Y+FS +A T L+ W++AR+ CR+ D VSL T EN FV I Y WT Sbjct: 1452 YYFS--NATTADLKT-WMEARDFCRKSRGDLVSLRTANENAFVFSEIK--TRYYYWT 1503 >SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) Length = 577 Score = 33.1 bits (72), Expect = 0.19 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = +2 Query: 266 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTS 445 H Y F H T W AR C+R D VS+ + QE +F+ ++ N +IWT Sbjct: 309 HCYLFRMFHRLT------WPQARLRCQREGGDLVSILSQQEKDFLIYQMKTVNGIWIWTG 362 Query: 446 -GRKCNFAGCDRGDLQPPNVNGWFW 517 + G + D P + W + Sbjct: 363 LNDRSVERGYEWSDGSPVSFTSWLY 387 >SB_27216| Best HMM Match : Lectin_C (HMM E-Value=1.9) Length = 168 Score = 31.5 bits (68), Expect = 0.59 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +2 Query: 314 VDWLDARNICRRHCMDA--VSLETPQENEFVKQRI-ARGNIRYIWTSGRKCNFAGC 472 V W +A C H +DA S ET ++ FV++ + R N+ I+ ++C+ GC Sbjct: 24 VSWSEAARFC--HVLDASLASAETLEKLRFVRRHVMMRSNVTDIFIGLQQCHDTGC 77 >SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) Length = 179 Score = 31.1 bits (67), Expect = 0.78 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Frame = +2 Query: 191 LALPDPRSCANRVRHSTYRDARGVLHSYFFSW-----EHAPTRSLEVDWLDARNICRRHC 355 L L DP C N ++ +++ ++H F W E + E++ + N CRR+ Sbjct: 13 LELVDPPGCRNSIKDKGEKESMEIVHVKFCKWLLGVFEFCSILAPEIETNFSTNRCRRY- 71 Query: 356 MDAVSLETPQENEFVKQRIARGNIRYIWTSGRKC---NFAGCDRGDLQPPNVNG 508 ++ P + R RG R+ + + +C + G D G + +V G Sbjct: 72 --MATVGKPVVPAALMNRPTRGERRFAYWALAECILAYYVGTDEGVSEVLHVAG 123 >SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12) Length = 872 Score = 29.5 bits (63), Expect = 2.4 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = +2 Query: 413 ARGNIRYIWTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPTTQRNTGDWSYTGGY 589 A G+ I T+ C +R L N G + G G+ + P + +N G +Y G Y Sbjct: 760 AIGDCSSIETAPHPCTAQVAERQGLYLANSLGLYSQGKGSDVKPFSWKNMGMLAYLGDY 818 >SB_21510| Best HMM Match : zf-C2H2 (HMM E-Value=6.3e-07) Length = 229 Score = 29.5 bits (63), Expect = 2.4 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Frame = -3 Query: 485 GHRGHSRRNYIYDQKSKCNVCFRERSFALQIRFPGVFLRKQRP--CNACGRCSLRPANPL 312 G+R R + ++ KC C + + A +++ + ++P C+ CG+CS + N Sbjct: 22 GNRNQHREKHYGNKPFKCEQCGKCFTEAARLK-DHILHTGEKPYQCSQCGKCSAKSGNHK 80 Query: 311 LSCVLEHVPS*RNTNVVLPVHRGMSNGVL 225 + VL H S + VL V R +++ V+ Sbjct: 81 IH-VLIH--SGKKPLSVLSVIRSLNSAVM 106 >SB_9786| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) Length = 129 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 317 DWLDARNICRRHCMDAVSLETPQENEFVKQRIA 415 +W DA ++CR V +E+ E+EFV + +A Sbjct: 23 NWYDAESMCRDLGGYLVKIESKSEDEFVSRELA 55 >SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 96 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 314 VDWLDARNICRRHCMDAVSLETPQENEFV 400 ++W DAR C + D V + + QEN FV Sbjct: 24 MNWADARTACGKLGGDLVKITSEQENTFV 52 >SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) Length = 3445 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 317 DWLDARNICRRHCMDAVSLETPQENEFVKQRIA 415 +W DA ++CR V +E+ E+EFV + +A Sbjct: 23 NWYDAESMCRDLGGYLVKIESKSEDEFVSRELA 55 >SB_4382| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) Length = 492 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 317 DWLDARNICRRHCMDAVSLETPQENEFVKQRIA 415 +W DA ++CR V +E+ E+EFV + +A Sbjct: 386 NWYDAESMCRDLGGYLVKIESKSEDEFVSRELA 418 >SB_14469| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 254 Score = 28.3 bits (60), Expect = 5.5 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -3 Query: 437 KCNVCFRERSFALQIRFPGVFLRKQRPCNACGRC 336 +C CF +RS +L+I K CN CG+C Sbjct: 117 QCGKCF-DRSTSLKIHLLTHSGHKPHQCNKCGKC 149 Score = 27.5 bits (58), Expect = 9.7 Identities = 17/66 (25%), Positives = 27/66 (40%) Frame = -3 Query: 515 RTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIRFPGVFLRKQRPCNACGRC 336 R+ + + H GH Q +KC CF + + L+ K C+ CG+C Sbjct: 124 RSTSLKIHLLTHSGHKPH-----QCNKCGKCFSQSGY-LKTHLMIHSGLKPHKCSECGKC 177 Query: 335 SLRPAN 318 P+N Sbjct: 178 FALPSN 183 >SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 363 Score = 27.9 bits (59), Expect = 7.3 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +2 Query: 320 WLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCNFAG 469 W DA +CR +++ E E +++ I N+ + W R + G Sbjct: 275 WRDAMTLCREQGAGLLTVRDANEMEVIRKHIKEKNL-FFWLGARYSHVNG 323 >SB_38264| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 209 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +2 Query: 446 GRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPTTQRNT 562 GR C C D + N+ GW G+ K PT N+ Sbjct: 39 GRYCQGRICANFDFEEGNLTGWIQEGTAFKNQPTYGDNS 77 >SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0) Length = 1182 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +2 Query: 311 EVDWLDARNICRRHCMDAVSLETPQENEFV 400 E+ W DAR C D V + + +ENEFV Sbjct: 134 EMAWNDARAACGDMGGDLVQIASKEENEFV 163 >SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) Length = 594 Score = 27.9 bits (59), Expect = 7.3 Identities = 15/45 (33%), Positives = 17/45 (37%) Frame = -3 Query: 614 LCYQAALDRSHRCKTNRPCYVGWWARSWLPNLTRTNRSHLEAVGH 480 LC Q +RSH+ C WA W L R H E H Sbjct: 225 LCKQRRHERSHQKNRQFKCNKCSWAFPWKCELVRHQTRHTEKYVH 269 >SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2323 Score = 27.9 bits (59), Expect = 7.3 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 Query: 320 WLDARNICRRHCMDAVSLETPQENEFVKQRI 412 W + R C+ D VS+ET +E F+ ++I Sbjct: 370 WTENREKCKSRNGDLVSMETEEEWSFINKKI 400 >SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 748 Score = 27.5 bits (58), Expect = 9.7 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -3 Query: 629 YLEQLLCYQAALDRSHRCKTN 567 Y E ++ Y+ A+D H+CK+N Sbjct: 703 YREYIMNYKTAIDTIHKCKSN 723 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,297,395 Number of Sequences: 59808 Number of extensions: 529257 Number of successful extensions: 2107 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1988 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2106 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1596754500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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