Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0845
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 33 0.23
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 31 0.52
U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 30 1.2
AF099919-5|AAC68804.1| 188|Caenorhabditis elegans Hypothetical ... 29 2.1
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 29 2.8
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 29 2.8
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41276-2|AAA82471.1| 82|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 27 8.5
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 27 8.5
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 27 8.5
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 27 8.5
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 27 8.5
AC006783-1|AAF60677.1| 143|Caenorhabditis elegans Hypothetical ... 27 8.5
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKI----GPTTQRNTGDWSYTGGYGQAQP 604
WT+G RG Q P GW +G I GPT + T W+ G G
Sbjct: 307 WTNGANGTTIDTSRGFTQRPTTAGWTNGANGTTIDTSRGPTHRPTTAGWT-NGANGTTID 365
Query: 605 DNREAAQ 625
+RE Q
Sbjct: 366 TSREFTQ 372
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT---TQR-NTGDWSYTGGYGQAQP 604
WT+G +G RG Q P + GW +G G + TQR T W+ G G
Sbjct: 649 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGTTSGTSRGFTQRPTTAGWT-NGANGTTSG 707
Query: 605 DNREAAQ 625
+R Q
Sbjct: 708 TSRGFTQ 714
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKI----GPTTQRNTGDWSYTGGYGQAQP 604
WT+G +G RG Q P + GW +G I G T + T W+ G G
Sbjct: 475 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGTTIDTSRGFTQRPTTAGWT-NGANGTTSG 533
Query: 605 DNREAAQ 625
+R Q
Sbjct: 534 TSRGFTQ 540
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKI----GPTTQRNTGDWSYTGGYGQAQP 604
WT+G +G RG Q P + GW +G I G T + T W+ G G
Sbjct: 601 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGTTIDTSRGFTQRPTTAGWT-NGANGTTSG 659
Query: 605 DNREAAQ 625
+R Q
Sbjct: 660 TSRGFTQ 666
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT---TQRNT 562
WT+G +G RG Q P + GW +G G + TQR T
Sbjct: 799 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGTTSGTSRGFTQRPT 843
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT 547
WT+G +G RG Q P + GW +G G T
Sbjct: 523 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGITRGQT 559
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT 547
WT+G +G RG Q P + GW +G G T
Sbjct: 721 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGITRGQT 757
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT---TQRNT 562
WT+G +G RG Q P GW +G G + TQR T
Sbjct: 697 WTNGANGTTSGTSRGFTQRPTTAGWTNGANGTTSGTSRGFTQRPT 741
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT 547
WT+G +G RG Q P GW +G G T
Sbjct: 823 WTNGANGTTSGTSRGFTQRPTAAGWTIRANGITRGQT 859
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKIGPT---TQRNTGDWSYTGGYGQAQPD 607
WT+G +G RG Q P GW +G G + QR T G G
Sbjct: 901 WTNGANGTTSGTSRGFTQRPTAAGWTNGANGTTSGTSRGFAQRPTAAGWTNGANGTTSGT 960
Query: 608 NR 613
+R
Sbjct: 961 SR 962
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +2
Query: 437 WTSGRKCNFAGCDRGDLQPPNVNGWFWSGSGAKI----GPTTQRNTGDWSYTGGYGQAQP 604
WT+G R Q P GW +G I GPT + T W G G +
Sbjct: 355 WTNGANGTTIDTSREFTQRPTTAGWTNGANGTTIDTSRGPTHRPTTAGWR-NGANGTTRD 413
Query: 605 DNREAAQ 625
+R Q
Sbjct: 414 TSRGFTQ 420
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 163 CREQNCCRQAKVPAHLCSVDE-DCETRMRVLAENGYGGRVLL*CNLYAMNDC 11
C EQ C+QAK H+C +C M L ENG R+ C++ +C
Sbjct: 359 CPEQYMCQQAKNLEHICCTKPLNCPAGMDALRENGGRPRI---CSMGVDGNC 407
>U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical
protein T19E7.1 protein.
Length = 178
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 311 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCN 460
+V W+ A N+CR VS++ EN FV + + N IW K N
Sbjct: 68 DVMWIPAENVCRSMGGHLVSIKDESENLFVHKLRKKNN---IWIGLNKLN 114
>AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.2 protein.
Length = 355
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 326 DARNICRRHCMDAVSLETPQENEFVK 403
DA+ IC+ C + VS+ + EN F++
Sbjct: 252 DAQEICKTRCANLVSISSANENRFIR 277
>AF099919-5|AAC68804.1| 188|Caenorhabditis elegans Hypothetical
protein F40G9.10 protein.
Length = 188
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 17/100 (17%)
Frame = +2
Query: 326 DARNICRRHCMDAVSLETPQENEFVKQRIARGN-----IRYI------------WTSGRK 454
DA N CR + S+ + EN+F+ Q A GN Y+ WT G
Sbjct: 73 DAHNACRSEGSELASIHSLTENQFLVQLSAAGNRVNSKTNYVMIGLIFENREWSWTDGSS 132
Query: 455 CNFAGCDRGDLQPPNVNGWFWSGSGAKIGPTTQRNTGDWS 574
N+ G +P N+ W+ + + P + W+
Sbjct: 133 VNYLNWAAG--EPNNMKHELWTALVSDVNPKKGQMYTHWN 170
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +2
Query: 398 VKQRIARGNIRYIWTSGRKCNFAGCDRGDLQPPNVNGWF--WSGSGAKIGPTTQRNTGDW 571
VK+ + +G R+ GR G G N +GW+ W GA T GDW
Sbjct: 182 VKKAVPQGK-RFPGAQGRMPGGRGM-YGGRGGNNNSGWYAGWGQIGAMPYGATGAAWGDW 239
Query: 572 SYTGGYGQ---AQPDNREAAQG 628
G YGQ A +N ++QG
Sbjct: 240 YGNGYYGQQGAAHHNNSGSSQG 261
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +2
Query: 398 VKQRIARGNIRYIWTSGRKCNFAGCDRGDLQPPNVNGWF--WSGSGAKIGPTTQRNTGDW 571
VK+ + +G R+ GR G G N +GW+ W GA T GDW
Sbjct: 182 VKKAVPQGK-RFPGAQGRMPGGRGM-YGGRGGNNNSGWYAGWGQIGAMPYGATGAAWGDW 239
Query: 572 SYTGGYGQ---AQPDNREAAQG 628
G YGQ A +N ++QG
Sbjct: 240 YGNGYYGQQGAAHHNNSGSSQG 261
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +2
Query: 248 DARGVLHSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNI 427
D G++ S W+H + + E + A+N R + + T + K+ + GN+
Sbjct: 355 DTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGFNAKELLYTGNL 414
Query: 428 RYI 436
R +
Sbjct: 415 RQL 417
>U41276-2|AAA82471.1| 82|Caenorhabditis elegans Hypothetical
protein C52B11.4 protein.
Length = 82
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 398 VKQRIARGNIRYIWTSGRK-----CNFAGCDRGDLQPPNVNG 508
V Q++ N+R+IW +GRK N C PPN G
Sbjct: 30 VDQKLNNRNLRFIWLNGRKGKERAANCHCCKTTQASPPNHAG 71
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 308 LEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNI 427
+E + LD R R C +A+ ++T E+ K+R+ R I
Sbjct: 371 MENNELDVRKTFLRDCREALGIDTAAEDRERKERLERERI 410
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 311 EVDWLDARNICRRHCMDAVSLETPQENEFV 400
E ++ A+N C + C D ++ T EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 510 GSGQVREPRSGPPPNVTRAIGLTP--VATVKRSLITEKLLK 626
G G REP S P P+ RA+ P VA+ + LI E L+
Sbjct: 6 GGGGPREPSSAPSPDHHRAMHSVPPIVASEMQQLIDEMRLQ 46
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 510 GSGQVREPRSGPPPNVTRAIGLTP--VATVKRSLITEKLLK 626
G G REP S P P+ RA+ P VA+ + LI E L+
Sbjct: 6 GGGGPREPSSAPSPDHHRAMHSVPPIVASEMQQLIDEMRLQ 46
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 314 VDWLDARNICRRHCMDAVSLETPQENEFVKQRI 412
+D DAR +C+R D VS+ + EN F++ +
Sbjct: 343 LDEPDARQVCQRVSGDLVSIHSQAENLFLQSLV 375
>AC006783-1|AAF60677.1| 143|Caenorhabditis elegans Hypothetical
protein Y48D7A.1 protein.
Length = 143
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 338 ICRRHCMDAV--SLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCD 475
IC +H M + ++ETP + + ++ G +RY+ + C+FA D
Sbjct: 66 ICVQHHMQCLQANVETP-DKVVINKKKPSGQVRYLGKNNFLCSFASSD 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,340
Number of Sequences: 27780
Number of extensions: 368935
Number of successful extensions: 1094
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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