Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0843
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    32   0.023
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           29   0.21 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.5  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   1.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.6  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    24   4.6  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   4.6  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 31.9 bits (69), Expect = 0.023
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 39  TPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMP 167
           +PR+   WP  R+  A  R+RST P+S     S P+++  R+P
Sbjct: 261 SPRSGGRWPSCRSPPARRRSRSTRPTSWP--RSRPTSKPKRLP 301


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 18/74 (24%), Positives = 30/74 (40%)
 Frame = +2

Query: 44  ARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVS 223
           A + C  W+PD ++V  G+    IIV  V       +   +     IT + W  ++  + 
Sbjct: 150 ATITCGIWTPDDQQVYFGTTQGQIIVMDVHGAMVSQVPLGS--DVGITAMAWSCEKFKME 207

Query: 224 TGQDANTRVWTVPK 265
            G+D    V    K
Sbjct: 208 EGEDTEPGVTNASK 221


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 120 SGALTSHPSTRSLRMPIPKV 179
           + AL SHP  RS  +PIP++
Sbjct: 419 TSALPSHPRRRSNSLPIPQI 438


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 80  KRVASGS-LDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTR 247
           K+ A+G+ L ++  +  + Q  + T  KN   Q Q+T L W+ +E +    +DA  R
Sbjct: 24  KKSATGTNLPSSPEMLILRQNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRR 80


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 154 DRVLGWLVNAPDDDGGVERARSDALRVRAPGHAVDA 47
           D V+G  VN      G+ER  +D  RV   G  +DA
Sbjct: 118 DTVIGGYVNVWSGAWGMERRPNDGERVSRGGVVMDA 153


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 370 STLQTDTPILFICIDYDYVRPKLEHYR 290
           S  Q  TP+L+  + YD VRP ++  R
Sbjct: 120 SRAQARTPVLYQVMVYDIVRPGVKGKR 146


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +3

Query: 15  PTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMPIPK 176
           P TR G     A      AR  SA    R TP  SSG  +  P  +  +  +PK
Sbjct: 120 PQTRKGRVPKEARKRDNNARQRSAQ---RETP-KSSGGQSKQPKKKKKKRSLPK 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,170
Number of Sequences: 2352
Number of extensions: 14758
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)