Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0839
(373 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 229 7e-61
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 2e-60
SB_56| Best HMM Match : Actin (HMM E-Value=0) 227 2e-60
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 227 2e-60
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 4e-60
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 7e-60
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 205 8e-54
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 7e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 87 3e-18
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 3e-11
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 64 5e-11
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.002
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 36 0.008
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.17
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 0.69
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 1.6
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 1.6
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 27 3.7
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 27 3.7
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 27 3.7
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2) 27 3.7
SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4) 27 4.9
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 27 4.9
SB_45827| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 27 6.4
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_77| Best HMM Match : cNMP_binding (HMM E-Value=0.0097) 27 6.4
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 27 6.4
SB_39599| Best HMM Match : Extensin_2 (HMM E-Value=0.09) 27 6.4
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_46368| Best HMM Match : DUF156 (HMM E-Value=6.5) 26 8.5
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 26 8.5
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 26 8.5
SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_28474| Best HMM Match : GSH_synthase (HMM E-Value=3.20001e-40) 26 8.5
SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 229 bits (559), Expect = 7e-61
Identities = 106/111 (95%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 199 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 258
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 259 NTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSIL 309
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 227 bits (556), Expect = 2e-60
Identities = 105/111 (94%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 237 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSIL 347
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 227 bits (556), Expect = 2e-60
Identities = 105/111 (94%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 296 NTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSIL 346
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 227 bits (555), Expect = 2e-60
Identities = 105/111 (94%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 237 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSIL 347
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 226 bits (553), Expect = 4e-60
Identities = 104/111 (93%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 210 IEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYA 269
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 270 NTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSIL 320
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 225 bits (551), Expect = 7e-60
Identities = 104/111 (93%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYA
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 296 NTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSIL 346
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 205 bits (501), Expect = 8e-54
Identities = 93/113 (82%), Positives = 104/113 (92%)
Frame = -3
Query: 341 PPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 162
P LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDL
Sbjct: 8 PILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDL 67
Query: 161 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
Y+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSIL
Sbjct: 68 YSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSIL 120
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.3 bits (229), Expect = 7e-21
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
L + Y LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y
Sbjct: 240 LVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK 299
Query: 155 NTVLSGGTTMYPGIADRMQKEITAL 81
+ VLSGG+TMYPG+ R+++EI L
Sbjct: 300 HIVLSGGSTMYPGLPSRLEREIKQL 324
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 87.4 bits (207), Expect = 3e-18
Identities = 41/73 (56%), Positives = 49/73 (67%)
Frame = -3
Query: 356 ELGTGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 177
E T E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D
Sbjct: 2274 EAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDID 2333
Query: 176 IRKDLYANTVLSG 138
+R +L+ N VLSG
Sbjct: 2334 LRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 60
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 59 KII---APPERKYSVWIGGSIL 3
K+I + E++++ WIGGSIL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSIL 227
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 63.7 bits (148), Expect = 5e-11
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Frame = -3
Query: 299 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 123
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 122 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSIL 3
R+Q++I + P ++ ++I+ ++Y+VW GGS+L
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSML 311
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Frame = -3
Query: 203 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 48
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 47 PP-ERKYSVWIGGSI 6
PP + W+GG+I
Sbjct: 124 PPVNANITAWLGGAI 138
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -3
Query: 200 SIMKCDVDIRKDLYANTVLSGGTTMYPG 117
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFL 240
T L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 863 TNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 269 PEALFQPSFLGMEACGIHET 210
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 0.69
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 7 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 180
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 181 TS 186
S
Sbjct: 815 AS 816
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 214
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAP 75
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 336 PREVLRTSRRSGHHYRKRKIPLPRGSLP 253
PR ++R HY++ +PLPRG P
Sbjct: 133 PRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 336 PREVLRTSRRSGHHYRKRKIPLPRGSLP 253
PR ++R HY++ +PLPRG P
Sbjct: 155 PRGGSPLTKRRESHYQEEGVPLPRGGGP 182
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 315 SRRSGHHYRKRKIPLPRGSLP 253
++R HY++ +PLPRG P
Sbjct: 265 TKRRESHYQQEGVPLPRGGSP 285
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ SE K SV +R + ++W+W+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWR 216
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2)
Length = 306
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -2
Query: 198 HHEVRRGHP*GLVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCS-SREEVLRM 22
++EV G+P H + YH VP A G H P + H S S VLR
Sbjct: 205 YYEVPHGYPAAPHGYHEVPHGYHAVPHGYYEVAHGYHEV-PHGYHEVPHGSRSASWVLRS 263
Query: 21 DRWI 10
W+
Sbjct: 264 GSWV 267
>SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -3
Query: 230 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 111
A H+ T + + + + +Y N ++ GT+ +PG++
Sbjct: 636 ALNFHDETGDILQSVTLKVGHVIYGNVLIPSGTSSFPGLS 675
>SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4)
Length = 368
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -1
Query: 370 THYRANWVPGPPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRS 242
T YR WV G +L NF L D VA + R+
Sbjct: 182 TRYRTAWVSGAAFSALANFSAEDFELQHLPDEVALPIKDRLRA 224
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 113 RFQGTWWYHRTIRCWRTSPYGCPRR 187
RF+ WY R C R YGCP R
Sbjct: 1613 RFRPQAWYSRV--CLRAEVYGCPDR 1635
>SB_45827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2047
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 363 IGRIGYRAPPREVLRTSRRSGHHYRKR 283
+ I Y RE + S R GHH+R R
Sbjct: 817 VSTISYSGTAREPVPVSGRGGHHFRCR 843
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK--LAASTRPHITP 197
S+ SE K SV +R + ++W+W+ TR ++ P
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRYVLP 262
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 133 VPPDNTVLAYKSLRMSTSHFMMELYVVSWMPQASIPKNEGWKRASGQ 273
+PP N L++ R + ++ + M +P+N GW+ +GQ
Sbjct: 560 LPPTNDSLSHHIKRANYQAYIWRSSTTA-MQNLPLPENNGWRNNAGQ 605
>SB_77| Best HMM Match : cNMP_binding (HMM E-Value=0.0097)
Length = 498
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 15 TDPYGVLPLWRSNDLNLHCRWGESCD 92
T P+ P+ R N L RW +CD
Sbjct: 265 TSPHRKQPIGRCNSLTYMSRWAAACD 290
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 155 WRTSPYGCPRRTS 193
W SPY CPRR S
Sbjct: 1115 WMCSPYNCPRRRS 1127
>SB_39599| Best HMM Match : Extensin_2 (HMM E-Value=0.09)
Length = 564
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -1
Query: 373 TTHYRANWVPGPPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS 194
T H R++W+ P S + SSL+ T R + + RS W AS TP
Sbjct: 183 TNHGRSSWLTNAPHPSRYTSNGLSSSLANTPH--PSRYTPHGRS-SWLANASHPSRYTPH 239
Query: 193 *SATWTS 173
++W S
Sbjct: 240 GRSSWIS 246
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 373 TTHYRANW--VPGPPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSW 239
TTHYRANW + L + P R+S++ K++V Q + R W
Sbjct: 73 TTHYRANWSSTAVAAALELVDPPGCRNSIA-GKNTVTQVGITLSRKW 118
>SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_46368| Best HMM Match : DUF156 (HMM E-Value=6.5)
Length = 203
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 297 HYRKRKIPLPRGSLPTLVLGYGSLRHPRDH 208
H+RKR LPR ++ + G GS PRD+
Sbjct: 58 HHRKRSRSLPRTNVFGTLNGLGSPPPPRDN 87
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ +ETK SV +R + + W+W+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWR 123
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 301 SSLSETKDSVAQRLSSNPRSWVWK 230
S+ +ETK SV +R + + W+W+
Sbjct: 902 STKNETKASVVERFNRTFKGWMWR 925
>SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_28474| Best HMM Match : GSH_synthase (HMM E-Value=3.20001e-40)
Length = 372
Score = 26.2 bits (55), Expect = 8.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 297 HYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEV 187
H RK +IPL R SL + +L G LR + I HEV
Sbjct: 255 HQRKPRIPLFRRSL-SAILKNGELREDKKLILEGHEV 290
>SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 20 VPGPPSRSTVSISLISNSCSPGDPLVLER 48
>SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 349 VPGPPSRSLTNFPTVRSSLSETKDSVAQR 263
VPGPPSRS + + +S S V +R
Sbjct: 18 VPGPPSRSTVSISLISNSCSPGDPLVLER 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,997,154
Number of Sequences: 59808
Number of extensions: 318580
Number of successful extensions: 1036
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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