Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0839
(373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 231 2e-61
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 231 2e-61
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 231 2e-61
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 231 2e-61
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 231 2e-61
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 231 2e-61
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 230 3e-61
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 230 3e-61
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 230 3e-61
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 224 2e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 219 7e-58
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 115 1e-26
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 111 2e-25
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 85 1e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 3e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 70 5e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 67 4e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 67 4e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.20
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.20
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.20
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 29 1.1
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 29 1.1
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 1.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.4
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 27 4.3
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 27 4.3
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 27 4.3
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 27 5.7
U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol 1,4,5-... 27 5.7
U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol 1,4,5-... 27 5.7
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 26 7.5
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 26 7.5
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 26 7.5
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 26 7.5
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 26 9.9
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 26 9.9
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 26 9.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 231 bits (564), Expect = 2e-61
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 231 bits (564), Expect = 2e-61
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 231 bits (564), Expect = 2e-61
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 231 bits (564), Expect = 2e-61
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 193 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 252
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 253 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 303
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 231 bits (564), Expect = 2e-61
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 223 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 282
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 283 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 333
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 231 bits (564), Expect = 2e-61
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 230 bits (562), Expect = 3e-61
Identities = 105/111 (94%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 230 bits (562), Expect = 3e-61
Identities = 105/111 (94%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 230 bits (562), Expect = 3e-61
Identities = 105/111 (94%), Positives = 110/111 (99%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 224 bits (547), Expect = 2e-59
Identities = 104/111 (93%), Positives = 109/111 (98%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSIL 346
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 219 bits (534), Expect = 7e-58
Identities = 101/111 (90%), Positives = 105/111 (94%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
LEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYA
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYA 295
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
NTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 296 NTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSIL 346
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 115 bits (276), Expect = 1e-26
Identities = 55/111 (49%), Positives = 71/111 (63%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+
Sbjct: 235 VKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYS 294
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+
Sbjct: 295 NIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIV 345
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 111 bits (267), Expect = 2e-25
Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y
Sbjct: 240 LSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYK 299
Query: 155 NTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGS 9
+ VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG+
Sbjct: 300 HIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGA 359
Query: 8 IL 3
+L
Sbjct: 360 VL 361
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 85.4 bits (202), Expect = 1e-17
Identities = 33/97 (34%), Positives = 63/97 (64%)
Frame = -3
Query: 293 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 114
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 113 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
A+++++E++ + P+T+ ++ P R + ++G I+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIV 524
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 74.1 bits (174), Expect = 3e-14
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Frame = -3
Query: 323 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 159
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 158 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSIL 3
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSIL 407
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 70.1 bits (164), Expect = 5e-13
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 17/116 (14%)
Frame = -3
Query: 299 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 123
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 122 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSIL 3
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+L
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSML 391
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 66.9 bits (156), Expect = 4e-12
Identities = 27/82 (32%), Positives = 49/82 (59%)
Frame = -3
Query: 299 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 120
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 119 GIADRMQKEITALAPSTMKIKI 54
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 66.9 bits (156), Expect = 4e-12
Identities = 27/82 (32%), Positives = 49/82 (59%)
Frame = -3
Query: 299 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 120
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 119 GIADRMQKEITALAPSTMKIKI 54
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 197 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKII 51
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVI 247
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.20
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 21 PYGVLPLWRSNDLNLHCRWGESCD 92
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.20
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 21 PYGVLPLWRSNDLNLHCRWGESCD 92
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.20
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 21 PYGVLPLWRSNDLNLHCRWGESCD 92
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 214
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 214
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 291 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 178
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 291 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 178
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 291 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 178
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 291 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 178
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 291 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 178
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 345 RAPPREVLRTSRRSGHHYRKRKIPLPRGS 259
R PP + +R++R+ G KRK +P GS
Sbjct: 379 RVPPHKKIRSTRQFGKRRVKRKPKVPVGS 407
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 270 PRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 172
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 270 PRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 172
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 328 SLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATW 179
S T+ T ++SET + + +S P +W ++ P P ++TW
Sbjct: 2501 SETSTSTSSQTVSETDGTTSMFQTSEPSTWQTSNEPTSEPTTVPLETSTW 2550
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 21 PYGVLPLWRSNDLNLHCRWGESCDF 95
PYG LP W + +NL G DF
Sbjct: 551 PYGYLPCWNNRLINLWSAPGYGSDF 575
>U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform b protein.
Length = 883
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -1
Query: 346 PGPPSRSLTNFPTVRSSLS-----ETKDSVAQRLSSNPRSWVWKLAASTRPHITP 197
P PP R L +FPT+R++ KD +A+ ++ + AS+ P+ P
Sbjct: 781 PLPPHRILQSFPTIRTNREAPHGRSLKDEIAKIAANRQKIQRVYTVASSSPYARP 835
>U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform a protein.
Length = 923
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -1
Query: 346 PGPPSRSLTNFPTVRSSLS-----ETKDSVAQRLSSNPRSWVWKLAASTRPHITP 197
P PP R L +FPT+R++ KD +A+ ++ + AS+ P+ P
Sbjct: 781 PLPPHRILQSFPTIRTNREAPHGRSLKDEIAKIAANRQKIQRVYTVASSSPYARP 835
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 293 IGNERFRCPEALFQPSF-LGMEACGIHETTYNSIMKCDVDIRKD 165
+GN F C E F M CG+ + N I+ C +++ K+
Sbjct: 188 VGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKN 231
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 293 IGNERFRCPEALFQPSF-LGMEACGIHETTYNSIMKCDVDIRKD 165
+GN F C E F M CG+ + N I+ C +++ K+
Sbjct: 188 VGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKN 231
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 293 IGNERFRCPEALFQPSF-LGMEACGIHETTYNSIMKCDVDIRKD 165
+GN F C E F M CG+ + N I+ C +++ K+
Sbjct: 163 VGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKN 206
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 293 IGNERFRCPEALFQPSF-LGMEACGIHETTYNSIMKCDVDIRKD 165
+GN F C E F M CG+ + N I+ C +++ K+
Sbjct: 166 VGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKN 209
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 346 PGPPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRP 209
P PP+RS + V S S+ S +SSN S+ L++S+ P
Sbjct: 874 PPPPARSARSASVVASRRSDAMTSSTSSISSN--SFTSPLSSSSLP 917
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 25.8 bits (54), Expect = 9.9
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 352 WVPGPPSRSLT 320
W+PGPP+R LT
Sbjct: 396 WIPGPPTRFLT 406
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 346 PGPPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRP 209
P PP+RS + V S S+ S +SSN S+ L++S+ P
Sbjct: 874 PPPPARSARSASVVASRRSDAMTSSTSSISSN--SFTSPLSSSSLP 917
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 25.8 bits (54), Expect = 9.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 10 DPPIHTEYF--LSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMST 183
D P+ T Y L A + I+ + IS +RS +P Y+ N + A + L ST
Sbjct: 31 DSPLFTAYMKLLKRQAELSPRILSALLSAISSIVRSHLPAYLKFQAKNGLTATEKLIQST 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,021,075
Number of Sequences: 27780
Number of extensions: 213910
Number of successful extensions: 703
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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