Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0839
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             237   4e-65
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.29 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   3.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   4.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   6.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   6.2  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  237 bits (579), Expect = 4e-65
 Identities = 110/111 (99%), Positives = 111/111 (100%)
 Frame = -3

Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
           LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA
Sbjct: 11  LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 70

Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
           NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSIL
Sbjct: 71  NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSIL 121


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.29
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -3

Query: 203 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 24
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 23  WI 18
           WI
Sbjct: 397 WI 398


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 150 RIVRWYHHVPWNRRPYAK 97
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 150 RIVRWYHHVPWNRRPYAK 97
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 308 RREVRKTSRGGARYPIRP 361
           R+++    R  +RYP+RP
Sbjct: 110 RQDIETIIRRNSRYPLRP 127


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 254 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 144
           + +FLG+    +   +YN +   D  + KDL+   +L
Sbjct: 328 ETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQIL 364


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 220 MPQASIPKNEGWKRASGQRNLSFPIVMT 303
           + Q  IP +      +G+RN+  PIV +
Sbjct: 165 LKQVKIPHDIAINSTTGKRNVVTPIVQS 192


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 372 RLTIGRIGYRAPPREVL 322
           R T G++ YR   +EVL
Sbjct: 20  RCTQGKVNYREKEKEVL 36


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 372 RLTIGRIGYRAPPREVL 322
           R T G++ YR   +EVL
Sbjct: 20  RCTQGKVNYREKEKEVL 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,851
Number of Sequences: 438
Number of extensions: 2687
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)