Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0839
(373 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 217 3e-57
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 214 1e-56
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 214 1e-56
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 214 1e-56
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 213 4e-56
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 213 4e-56
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 211 1e-55
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 206 5e-54
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 206 5e-54
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 203 3e-53
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 189 4e-49
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 158 1e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 4e-23
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 99 5e-22
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 91 2e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 80 4e-16
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 63 5e-11
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 61 3e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 54 4e-08
At5g43500.2 68418.m05318 expressed protein 36 0.009
At5g43500.1 68418.m05319 expressed protein 36 0.009
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 33 0.061
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 0.43
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 0.56
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 1.7
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 2.3
At4g19110.1 68417.m02819 protein kinase, putative contains prote... 28 2.3
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 27 3.0
At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative (CH... 27 3.0
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 27 4.0
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 27 4.0
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 4.0
At5g64220.1 68418.m08067 calmodulin-binding protein similar to a... 27 5.3
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 27 5.3
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 5.3
At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding ... 27 5.3
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 27 5.3
At4g24175.1 68417.m03469 expressed protein 26 7.0
At1g25320.1 68414.m03142 leucine-rich repeat transmembrane prote... 26 7.0
At5g45840.1 68418.m05639 leucine-rich repeat transmembrane prote... 26 9.2
At4g28650.1 68417.m04095 leucine-rich repeat transmembrane prote... 26 9.2
At4g18640.1 68417.m02759 leucine-rich repeat transmembrane prote... 26 9.2
At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical ... 26 9.2
At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical ... 26 9.2
At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical ... 26 9.2
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 26 9.2
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 26 9.2
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 26 9.2
At2g42880.1 68415.m05309 mitogen-activated protein kinase, putat... 26 9.2
At2g29050.1 68415.m03531 rhomboid family protein contains PFAM d... 26 9.2
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 217 bits (529), Expect = 3e-57
Identities = 99/115 (86%), Positives = 105/115 (91%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 214 bits (523), Expect = 1e-56
Identities = 98/115 (85%), Positives = 105/115 (91%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 214 bits (523), Expect = 1e-56
Identities = 98/115 (85%), Positives = 105/115 (91%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 214 bits (523), Expect = 1e-56
Identities = 98/115 (85%), Positives = 105/115 (91%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 213 bits (519), Expect = 4e-56
Identities = 96/115 (83%), Positives = 105/115 (91%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 213 bits (519), Expect = 4e-56
Identities = 96/115 (83%), Positives = 105/115 (91%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 211 bits (515), Expect = 1e-55
Identities = 96/111 (86%), Positives = 104/111 (93%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 206 bits (502), Expect = 5e-54
Identities = 95/115 (82%), Positives = 102/115 (88%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 206 bits (502), Expect = 5e-54
Identities = 95/115 (82%), Positives = 102/115 (88%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T +EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 293
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 294 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 203 bits (496), Expect = 3e-53
Identities = 91/115 (79%), Positives = 101/115 (87%)
Frame = -3
Query: 347 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 168
T ++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHETTYNSIMKCDVDIRK
Sbjct: 235 TSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRK 294
Query: 167 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
DLY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSIL
Sbjct: 295 DLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSIL 349
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 189 bits (461), Expect = 4e-49
Identities = 86/111 (77%), Positives = 96/111 (86%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKCD DIRKDLY
Sbjct: 190 IDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYG 249
Query: 155 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSIL
Sbjct: 250 NIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSIL 300
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 158 bits (383), Expect = 1e-39
Identities = 70/114 (61%), Positives = 88/114 (77%)
Frame = -3
Query: 344 GPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKD 165
G ++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+KC VD R+D
Sbjct: 224 GWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRD 283
Query: 164 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSIL
Sbjct: 284 MYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSIL 337
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (247), Expect = 4e-23
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 11/122 (9%)
Frame = -3
Query: 335 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 156
L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + + I + D+D R LY
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQ 296
Query: 155 NTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGS 9
+ VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG+
Sbjct: 297 HIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGA 356
Query: 8 IL 3
+L
Sbjct: 357 VL 358
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 99 bits (238), Expect = 5e-22
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 15/123 (12%)
Frame = -3
Query: 326 SYELPDGQVITIGNERFRCPEALFQPSFL----GMEAC--------GIHETTYNSIMKCD 183
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 182 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGG 12
VDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 11 SIL 3
SIL
Sbjct: 410 SIL 412
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 91.1 bits (216), Expect = 2e-19
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Frame = -3
Query: 329 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 150
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E I + + L NT
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280
Query: 149 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSIL 3
VL GGTT G R QKE L S ++ ++ PPE YS W+GG+IL
Sbjct: 281 VLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAIL 334
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 80.2 bits (189), Expect = 4e-16
Identities = 37/99 (37%), Positives = 57/99 (57%)
Frame = -3
Query: 299 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 120
I + NERF PE LFQP+ LGM G+ E +I C ++ LY + +L+GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 119 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 3
+ +R++ E+ L P +KI + VW GGS+L
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLL 391
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 63.3 bits (147), Expect = 5e-11
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = -3
Query: 299 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTT 129
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +++GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 128 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 9
+ PG+ +R++ I + P I ++ + W G S
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGAS 688
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 60.9 bits (141), Expect = 3e-10
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = -3
Query: 332 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD-VDIRKD--L 162
+ S E+ T+ ERF+ E LFQP GM A +H+ + CD + D
Sbjct: 332 QASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSW 391
Query: 161 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSIL 3
+ VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLI 446
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 53.6 bits (123), Expect = 4e-08
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Frame = -3
Query: 293 IGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 117
+G ERF PE F P + + I +D R+ LY N VLSGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 116 IADRMQKEITALAPS----------------TMKIKIIAPPERKYSVWIGGSIL 3
R+Q+++ + + +++ +++ P ++++VW GGS+L
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVL 393
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.9 bits (79), Expect = 0.009
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = -3
Query: 233 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 57
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 56 II----APPERKYSVWIGGSIL 3
+ + E ++ W GG+IL
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAIL 539
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.9 bits (79), Expect = 0.009
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = -3
Query: 233 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 57
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 56 II----APPERKYSVWIGGSIL 3
+ + E ++ W GG+IL
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAIL 551
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 33.1 bits (72), Expect = 0.061
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -3
Query: 221 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 42
I E Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 41 ERKYS 27
+RK++
Sbjct: 393 DRKHA 397
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 18 DPYGVLPLWRSNDLNLHCRW-GESCD 92
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 0.56
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 12 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 119
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -3
Query: 221 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 42
I E Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 41 ERKYS 27
ERK++
Sbjct: 394 ERKHA 398
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 21 PYGVLPLWRSNDLNLHCRWGESCDF 95
P GV+PL NDL+ WG S F
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPF 216
>At4g19110.1 68417.m02819 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 461
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 364 YRANWVPGPPSRSLTNFPTVRSSLSETKDSVA 269
YR PP+ SL RSS+SET D +A
Sbjct: 373 YRPPGKKSPPAASLNKNRVTRSSVSETADKLA 404
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 21 PYGVLPLWRSNDLNLHCRWGESCDF 95
P GV+PL NDL+ WG S F
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPF 213
>At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative
(CHX23) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 867
Score = 27.5 bits (58), Expect = 3.0
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 34 FLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMSTSHFM 195
FLSG M L +I+ G RA I F ++ MVV ++ L + TS FM
Sbjct: 333 FLSGILMPLFYIICGLRADIGFMLQFTDKFMMVVVICSSFLVKIVTTVITSLFM 386
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 340 PPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWK 230
PPS L++F ++ SS S+AQR + P+ + K
Sbjct: 17 PPSNRLSSFVSISSSSFGRTQSIAQRKARFPKIYAAK 53
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 9 RSTDPYGV--LPLWRSNDLNLHCRWGESCDFLL 101
+S DP GV LP+ S DL L C W ES F L
Sbjct: 572 KSPDP-GVEFLPIEDSGDLELCCPWNESEQFEL 603
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +1
Query: 142 DNTVLAYKSLR-----MSTSHFMMELYVVSWMPQASIPKNEGWKRASGQRNLSFPIVMT* 306
D T++A K L+ S F MEL ++S ++ + G+ SG+R L +P +
Sbjct: 324 DGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM--- 380
Query: 307 PSGS 318
P+GS
Sbjct: 381 PNGS 384
>At5g64220.1 68418.m08067 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1050
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRKRK 280
R+VLR R+ GH++RK+K
Sbjct: 62 RKVLRYFRKDGHNWRKKK 79
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRKRK 280
R+VLR R+ GH++RK+K
Sbjct: 65 RKVLRYFRKDGHNWRKKK 82
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 92 FPFAYGRRFQGTWWYHRTIRCWRTSPYGCPRRTS*WSYM 208
+ +A G+ G+W +T++CW P RT +Y+
Sbjct: 106 YSYAAGQVITGSW--DKTVKCWDPRGASGPERTQVGTYL 142
>At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding
protein, putative (SR1) identical to partial sequence of
ethylene-induced calmodulin-binding protein GI:11545505
from [Arabidopsis thaliana]; contains Pfam profiles
PF03859: CG-1 domain, PF00612: IQ calmodulin-binding
motif, and PF00023: Ankyrin repeat
Length = 1032
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRKRK 280
R+VLR R+ GH++RK+K
Sbjct: 62 RKVLRYFRKDGHNWRKKK 79
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -1
Query: 334 SRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SAT 182
S S +F + ++++ AQ +S+PR W+ + A S+ T S S +
Sbjct: 142 SSSPFSFGSAPAAITSVSSGPAQSPASSPRLWIDRFATSSSASATSSSSTS 192
>At4g24175.1 68417.m03469 expressed protein
Length = 306
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = -2
Query: 333 REVLRTSRRSGHHYRK------RKIPLPRGSLPTLVL 241
R + + S + HH+R +K+P P S+PTL+L
Sbjct: 6 RPIRQLSPQCNHHFRNLRYLFSKKLPNPPSSIPTLLL 42
>At1g25320.1 68414.m03142 leucine-rich repeat transmembrane protein
kinase, putative similar to putative receptor-like
protein kinase GI:4262228 from [Arabidopsis thaliana]
Length = 702
Score = 26.2 bits (55), Expect = 7.0
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = +3
Query: 12 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRXXXXXXXXXXXXXXXLTDV-HV 185
S DP G L W S + N C W G +CD V S L+++ H+
Sbjct: 38 SKDPDGSLSNWNSENQN-PCSWNGVTCDDNKVVVSLSIPKKKLLGYLPSSLGLLSNLRHL 96
Query: 186 ALHDGVICGLVDAASFHTQERGLEESLWATESFVSDSDDLTVG--KFVRLLE 335
L + G + F Q GL +SL +F+S S +G KF+++L+
Sbjct: 97 NLRSNELSGNLPVELFKAQ--GL-QSLVLYGNFLSGSIPNEIGDLKFLQILD 145
>At5g45840.1 68418.m05639 leucine-rich repeat transmembrane protein
kinase, putative and genscan+
Length = 668
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 15 TDPYGVLPLWRSNDLNLHCRW-GESC 89
+DP+G L W +D + C W G +C
Sbjct: 46 SDPHGTLANWNVSDHDHFCSWFGVTC 71
>At4g28650.1 68417.m04095 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase 5,
Arabidopsis thaliana, PIR1:S27756
Length = 1013
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 18 DPYGVLPLWRSNDLNLHCRW-GESCD 92
DP L W+ +D + HC W G C+
Sbjct: 43 DPLNFLKDWKLSDTSDHCNWTGVRCN 68
>At4g18640.1 68417.m02759 leucine-rich repeat transmembrane protein
kinase, putative
Length = 686
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 12 STDPYGVLPLWRSNDLNLHCRW-GESC 89
++DP+G L W + +N C W G +C
Sbjct: 41 NSDPHGTLANWNVSGINDLCYWSGVTC 67
>At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 453
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 339 PPREVLRTSRRSGHHYRK-RKIPLPRGS 259
PP VLR RRS ++R+ K+ P G+
Sbjct: 345 PPHMVLRADRRSEKYFRRGAKLDWPEGA 372
>At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 467
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 339 PPREVLRTSRRSGHHYRK-RKIPLPRGS 259
PP VLR RRS ++R+ K+ P G+
Sbjct: 359 PPHMVLRADRRSEKYFRRGAKLDWPEGA 386
>At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 467
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 339 PPREVLRTSRRSGHHYRK-RKIPLPRGS 259
PP VLR RRS ++R+ K+ P G+
Sbjct: 359 PPHMVLRADRRSEKYFRRGAKLDWPEGA 386
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 140 GGTTMYPGIADRMQKEITALAPSTMKIKII 51
G + +Y G+ D QK I + T+ KI+
Sbjct: 212 GASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 140 GGTTMYPGIADRMQKEITALAPSTMKIKII 51
G + +Y G+ D QK I + T+ KI+
Sbjct: 419 GASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 25.8 bits (54), Expect = 9.2
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -1
Query: 367 HYRANWVPGPPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTR 212
H NW PP S F T R L T D +RL++ +S AA+ R
Sbjct: 461 HVERNWNIRPPGFSSDEFKTFRKPL--TTDIHKERLAAIKKSVTATEAANAR 510
>At2g42880.1 68415.m05309 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK20) mitogen-activated protein
kinase (MAPK)(AtMPK20), PMID:12119167
Length = 606
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 128 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 27
+YP D+ +++ L ++ K +AP ERK++
Sbjct: 377 LYPSAVDQFRRQFAHLEENSGKTGPVAPLERKHA 410
>At2g29050.1 68415.m03531 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 389
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 27 GVLPLWRSNDLNLHCRW 77
G++ L R DLN HC W
Sbjct: 311 GLVVLLRGTDLNKHCSW 327
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,759,381
Number of Sequences: 28952
Number of extensions: 211132
Number of successful extensions: 737
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -