Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0838
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.0  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 476 RKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQ 369
           RKV            +PTPN   R  PL I   +L+
Sbjct: 343 RKVSPRVNTIKHTSCIPTPNGDSRLPPLEISLKTLE 378


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 476 RKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQ 369
           RKV            +PTPN   R  PL I   +L+
Sbjct: 343 RKVSPRVNTIKHTSCIPTPNGDSRLPPLEISLKTLE 378


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 588 VDRWYVFLHFFKKSIPIDTIKCIF*IHL 505
           +D  Y+F+H   +    DT+  I+  +L
Sbjct: 294 IDTMYLFIHIRSRQEDTDTLVVIYTFNL 321


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 588 VDRWYVFLHFFKKSIPIDTIKCIF*IHL 505
           +D  Y+F+H   +    DT+  I+  +L
Sbjct: 250 IDTMYLFIHIRSRQEDTDTLVVIYTFNL 277


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 404 NIPLNIGRTSLQQS 363
           ++PLNI R  LQQ+
Sbjct: 382 DLPLNISREMLQQN 395


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 648 HKALL-INQLRWITIALIKVRVDRWYVFLHFF 556
           H +L  ++ L WIT+  I +  D + V   FF
Sbjct: 247 HNSLYSLHLLLWITVTFILLVGDSYIVMYVFF 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,294
Number of Sequences: 336
Number of extensions: 3950
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)