Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0838
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1509 - 27246721-27247350 33 0.27
05_01_0120 - 828834-831143 33 0.27
11_08_0024 + 27747449-27747940,27748141-27750177 32 0.35
05_04_0146 + 18393447-18394043 30 1.4
02_05_1162 - 34593101-34594624 30 1.4
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 30 1.9
03_05_0784 + 27678018-27678623,27678762-27678935 30 1.9
04_04_1621 + 34842062-34842066,34842270-34842921 29 2.5
02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459 29 2.5
08_02_1030 - 23786760-23787812,23787891-23788319,23788410-237885... 29 3.3
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 29 3.3
02_05_0883 - 32481502-32483085 29 3.3
11_06_0610 - 25449085-25453284 29 4.3
10_08_0668 + 19737875-19738073,19738157-19738304,19738315-197384... 29 4.3
03_05_1137 + 30652967-30653183,30653281-30653485,30653696-306537... 29 4.3
12_02_0031 - 12477787-12478413,12480182-12480268,12480371-124805... 28 5.7
06_02_0186 + 12787866-12788055,12788575-12788642,12788864-127890... 28 5.7
05_04_0399 - 20955319-20955838,20955939-20956201 28 5.7
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 28 7.6
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 28 7.6
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 28 7.6
>07_03_1509 - 27246721-27247350
Length = 209
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -2
Query: 511 PPSPILRHHPP*ERCEPHVPQLHSRPLYRRPTVSAGTSHSISAEPLCSKA 362
PPSP+L P +C P P PL R P VS+ + P C A
Sbjct: 28 PPSPVLGSLPSAIKCNPLAPFYRFSPLPRSPVVSSHLPTVALSLPRCRPA 77
>05_01_0120 - 828834-831143
Length = 769
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -1
Query: 569 SFTSLRKAFLSIQLNAFFKSTFTNTSAPPPLRKVR-AACTAASQPPFVPTPNCIGRNIPL 393
+++SLR+ F+S L + + P + +V+ A A++ PPF+ +P+ + + +
Sbjct: 457 TWSSLRRKFISRSLARVYSDSALIRDLDPRVDRVQHLAAEASTSPPFL-SPSSLSSDSSI 515
Query: 392 NIGRTSLQQSLDTMRRSVPPTAIGLIPPS 306
+ +S SL S PT++GL P S
Sbjct: 516 SSKYSSDSPSLSPSTSS--PTSLGLSPAS 542
>11_08_0024 + 27747449-27747940,27748141-27750177
Length = 842
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 187 VGRSLLKSIVSLVNLMLAGSVPDSIADILYGANLCALMKKD-GGIRPIAVGGTLRRIVSR 363
+G S+++L L GS+PD I L+ L L G+ P ++G R V R
Sbjct: 104 IGNLSFLSVLNLTITNLTGSIPDDIGR-LHRLELLDLGNNAFSGVIPASIGNLTRLGVLR 162
Query: 364 LCCKEVL-PILSGMFRPIQLGV 426
L + P+ G+F LGV
Sbjct: 163 LAVNRLTGPVPPGVFNMSMLGV 184
>05_04_0146 + 18393447-18394043
Length = 198
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 500 NTSAPPPLRKVRAACTAAS-QPPFVPTP 420
+ S PPP R+ AA AAS PP+ P+P
Sbjct: 85 SASPPPPEREAAAAMAAASASPPWAPSP 112
>02_05_1162 - 34593101-34594624
Length = 507
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -1
Query: 479 LRKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQQSLDTMRRSVPPTAIGLIPPS 306
L K++ A TAA QPP P P P + R S D++ R+ PP + PP+
Sbjct: 301 LEKLQFADTAAQQPPPPPAP-ATAAPPPAALPRNG---SDDSLTRAYPPATVTPTPPT 354
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 29.9 bits (64), Expect = 1.9
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = -1
Query: 485 PPLRKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQQSLDTMRRSVP-PTAIGLIP- 312
P AA AA+ P F+ P+ IGR+ + RT ++ T RR P P + P
Sbjct: 57 PATSAAAAAAAAAAVPSFLTNPSRIGRHFDED-ERTPF-EAASTPRRPAPSPPSFAPSPA 114
Query: 311 --PSFFIKAHKFAPYKISAILSGTL-PASIKLTSETILLSKDRPTSPAETLIKSLKCCGD 141
P+ + + P + +A + + PA+ I + + A + S +
Sbjct: 115 AGPTRSGPGNAWGPRREAAPTAAPVSPAASGGGGGQIWSATRIAQASAVEKVISGRWNSS 174
Query: 140 RPSSPPAEPFLKDVIV 93
+PSSPPA P V+V
Sbjct: 175 KPSSPPAAPVSVPVVV 190
>03_05_0784 + 27678018-27678623,27678762-27678935
Length = 259
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = -3
Query: 600 IKVRVDRWYVFLHFFKKSIPIDTIKCIF*IHLHQYFGTTPLKKGASRMYRSF---TAALC 430
I V D Y+ + S+P DT+ + H+H +F + P+K+G M F L
Sbjct: 162 ISVVEDAIYLLEDLARGSVPFDTVAEVEG-HVHLFFLSIPVKEGCDTMIGIFFVPNKGLI 220
Query: 429 TDAQLYRPEHPTQYRQNLFAAKPGYNAAQCTANSDRPNTAIFL 301
+D +++ +L A P QC NSD A FL
Sbjct: 221 SD----HLSSSSRFTFHLEANVP--YCGQCNTNSDSMRKADFL 257
>04_04_1621 + 34842062-34842066,34842270-34842921
Length = 218
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 448 AAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEVKE-HIPSIYPYLYQCYGNPSK 624
AA R K LV+V + + C+D N +E+ E +P Y+ + + + K
Sbjct: 123 AAAKKKRKVFKCRVPNSLVEVMITQPYKCVDHNRSQEELAELAVPHRQIYILRKFIDEKK 182
Query: 625 LVYKESLVE 651
+ Y+++L++
Sbjct: 183 MNYEQTLID 191
>02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459
Length = 867
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Frame = +1
Query: 85 VLTTITSFKNGSAGGLDGL---SPQH--FKDL-INVSAG----DVGRSLLKSIVSLVNLM 234
V+T IT F +GGL L H F DL IN G D+GR S + L N
Sbjct: 86 VVTNITLFSCNISGGLSKLRFAQLPHLVFLDLSINSLYGPIPSDIGRLAELSYLDLSNNK 145
Query: 235 LAGSVPDSIADI 270
L GS+P SI ++
Sbjct: 146 LTGSIPPSIGNL 157
>08_02_1030 -
23786760-23787812,23787891-23788319,23788410-23788526,
23788820-23789083
Length = 620
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 272 KISAILSGTLPASIKLTSETILLSKDRPTSPAETLIKSLKCCGDRPSSPPAEPFLK 105
K+ A +G +PA +K+ + L D S L + CCG+ ++P E ++
Sbjct: 499 KVRATQAGIVPALLKIIDDKALNMVDEALSIFLLLSSNAACCGEIGTTPFIEKLVR 554
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 436 GGCEAAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEV---KEHIPSIYPYLYQC 606
GG AA +AARTF++ G A+ + + K A+ +R A K + P+ P + C
Sbjct: 61 GGGNAAGYAARTFVEHGMADGRLCIVSKEAYPPYERPALTKGYLFPPDKKPARLPGFHTC 120
Query: 607 YGN 615
G+
Sbjct: 121 VGS 123
>02_05_0883 - 32481502-32483085
Length = 527
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -1
Query: 251 GTLPASIKLTSETILLSKDRPTSPAETLIKSLKCCGDRPSSPPA 120
G LPA+ S +L S P TL+ L C D PSSP A
Sbjct: 78 GDLPAAAAALS-AMLSSPAAPVPNDVTLLTVLSACADSPSSPLA 120
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 511 PPSPILRHHPP*ERCEPHVPQLHSRPLYRRPTVSAGTSHSISAEPLCSKA 362
PPSP+ PP + PH P + P PT S+ +++EP +K+
Sbjct: 1033 PPSPVESVLPPVKSSPPHAPVISEPP----PTKSSPPQVPVTSEPPPAKS 1078
>10_08_0668 +
19737875-19738073,19738157-19738304,19738315-19738453,
19738521-19738664,19739502-19739561,19740058-19740190,
19740669-19740865
Length = 339
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = -1
Query: 506 FTNTSAPPPLRKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQQSLDTMRRSVPPTA 327
FT++S+P R+ RAA AS P P + + L++ R +L + + S P
Sbjct: 24 FTSSSSPRRRRRPRAARVRASGSD--PPPQQQQQQVNLSVLRFTL--GIPGLDESYLPRW 79
Query: 326 IGLIPPSFFIKAHKFAPYKISAILSGTL 243
IGL + + H +P A L GTL
Sbjct: 80 IGLGFGALVLLNHLLSPSPTPAQLVGTL 107
>03_05_1137 +
30652967-30653183,30653281-30653485,30653696-30653786,
30653904-30654046,30654186-30654429,30654536-30654640,
30654985-30655167,30655255-30655459,30655552-30656036
Length = 625
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 348 PHCIQALLQRGSADIEWDVPADTVGRRYKGRL*SCGTCGSH-LS*GGWCRSIGE 506
P +Q+L S ++ DVP++ VGR Y G C H + GG + I E
Sbjct: 189 PKVVQSLTTLISG-LQGDVPSNDVGRPYVGGSKKVAACAKHYVGDGGTVKGINE 241
>12_02_0031 -
12477787-12478413,12480182-12480268,12480371-12480562,
12480638-12480766,12480840-12480926,12483076-12483537,
12485088-12485222
Length = 572
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 211 IVSLVNLMLAGSVPDSIADILYGANLCALMKKDGG 315
+V + +++A VPD + I+ G+ + ALM +GG
Sbjct: 429 LVESIMMVIAAVVPDFLMGIVVGSGVQALMMTNGG 463
>06_02_0186 +
12787866-12788055,12788575-12788642,12788864-12789007,
12789112-12789268,12789344-12789366,12789487-12789495,
12789694-12790108,12790449-12790652,12790741-12791201,
12791206-12791476,12791560-12791951
Length = 777
Score = 28.3 bits (60), Expect = 5.7
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 3/171 (1%)
Frame = +1
Query: 67 RVSLDDVLTTITSFKNGSAGGLDGLSPQHFKDLINVS-AGDVGRSLLKSI-VSLVNLMLA 240
R +L +L T + + A G+D LSP+H K I++ G+ ++I S
Sbjct: 105 RKTLGGMLRTAVALMS-MAVGVDPLSPRHRKPRIDIGFLTKKGKQARQAIGESWARFFFT 163
Query: 241 GSVPDSIADILYGANLCALMKKDG-GIRPIAVGGTLRRIVSRLCCKEVLPILSGMFRPIQ 417
+PD AD Y + +K G + V +R++V + + ++ I++
Sbjct: 164 AGIPDRNADNSYFVSAVRETRKWGESVLLQLVRREIRKVVCEIGPEHIIQIIT------D 217
Query: 418 LGVGTKGGCEAAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEVKE 570
G K C +T + V + LK +D ++ KE
Sbjct: 218 NGSNYKKACRVLRQEYKTIVWQPCVAHTVNLMLKEVGKMLDHEMVIESAKE 268
>05_04_0399 - 20955319-20955838,20955939-20956201
Length = 260
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -1
Query: 542 LSIQLNAFFKSTFTNTSAPPPLRKVRAA---CTAASQPPFVPTPNCIGRNIPLNIGRTSL 372
+S+ A + F PPP R V ++ C ++S P C N+ L++G T
Sbjct: 150 ISVPAKAAAAAIFAVAKPPPPPRPVDSSDDGCRSSSGTTSTGEPRCPDLNLELSVGPTPS 209
Query: 371 QQSLDTMRRSVP 336
+T + P
Sbjct: 210 SPPAETPTSARP 221
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 206 LSKDRPTSPAETLIKSLKCCGDRPSSPPAEPFLKDVIVV 90
L+K PT E +K GD PAE FLKDV+ V
Sbjct: 390 LAKMAPTKEEELKLKGYS--GDLSKIDPAERFLKDVLGV 426
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 517 LNPPSPILRHHPP*ERCEPHVPQLHSRPLYRRPTVSAGTSHSISAEPLCS 368
LNP +P+L HHP QL R + R +S+ TS+S S+ P S
Sbjct: 97 LNPSAPLLHHHPK--------LQLQPR-RFTRSLLSSRTSNSSSSSPSAS 137
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 ITSFKNGSAGGLDGLSPQHFKD-LINVSAGDVGRSLLKSIVSLVNLMLAGSVPD 255
+TS K SAG L + KD N + DV R S+ S+ LAG+ PD
Sbjct: 589 VTSMKRLSAGAWHKLFSKCLKDGAKNSVSADVYRDRKASLRSIAEAALAGNNPD 642
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,109,622
Number of Sequences: 37544
Number of extensions: 484939
Number of successful extensions: 1916
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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