Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0838
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19500.1 68418.m02323 tryptophan/tyrosine permease family pro... 32 0.29
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.51
At1g63940.4 68414.m07242 monodehydroascorbate reductase, putativ... 31 0.51
At1g63940.3 68414.m07239 monodehydroascorbate reductase, putativ... 31 0.51
At1g63940.2 68414.m07240 monodehydroascorbate reductase, putativ... 31 0.51
At1g63940.1 68414.m07241 monodehydroascorbate reductase, putativ... 31 0.51
At1g72270.1 68414.m08355 expressed protein 31 0.68
At5g24430.1 68418.m02879 calcium-dependent protein kinase, putat... 30 1.2
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 30 1.6
At5g19670.1 68418.m02340 exostosin family protein contains Pfam ... 29 2.1
At4g15760.1 68417.m02399 monooxygenase, putative (MO1) similar t... 29 2.1
At3g19700.1 68416.m02495 leucine-rich repeat transmembrane prote... 29 2.1
At3g11397.1 68416.m01389 prenylated rab acceptor (PRA1) family p... 29 2.7
At1g70370.1 68414.m08095 BURP domain-containing protein / polyga... 29 2.7
At1g66940.2 68414.m07609 protein kinase-related 29 2.7
At1g66940.1 68414.m07608 protein kinase-related 29 2.7
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 2.7
At1g66880.1 68414.m07601 serine/threonine protein kinase family ... 29 3.6
At1g28220.1 68414.m03464 purine permease, putative similar to pu... 29 3.6
At2g12940.1 68415.m01419 expressed protein 28 4.8
At1g23760.1 68414.m02998 BURP domain-containing protein / polyga... 28 4.8
At4g08960.1 68417.m01476 phosphotyrosyl phosphatase activator (P... 28 6.3
At4g00450.1 68417.m00062 expressed protein 28 6.3
At2g18760.1 68415.m02184 SNF2 domain-containing protein / helica... 28 6.3
At5g12940.1 68418.m01484 leucine-rich repeat family protein cont... 27 8.4
At2g28380.1 68415.m03449 double-stranded RNA-binding domain (DsR... 27 8.4
>At5g19500.1 68418.m02323 tryptophan/tyrosine permease family
protein contains Pfam profile PF03222:
Tryptophan/tyrosine permease family
Length = 505
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 341 VPPTAIGLIPPSFFIKAHKFAPYKISAILSGTLPASIKLTSETILLS 201
VPP + L+ P F KA FA +L G LPA++ + I+ S
Sbjct: 416 VPPLVLSLLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRYIVSS 462
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 191 PTSPAETLIKSLKCCGDRPSSPPAEPFLKDVIVVRTSSRDTRGKVVED 48
PTSPA L+ L R SSP A D ++R S T + V+D
Sbjct: 5 PTSPAPNLLLRLFSSNKRASSPTAALLTGDFHLIRHFSAGTAARAVKD 52
>At1g63940.4 68414.m07242 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 482
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 GGCEAAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEV---KEHIPSIYPYLYQC 606
GG AA +AARTF++ G A+ + + K A+ +R A K E P+ P + C
Sbjct: 60 GGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTC 119
Query: 607 YG 612
G
Sbjct: 120 VG 121
>At1g63940.3 68414.m07239 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 416
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 GGCEAAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEV---KEHIPSIYPYLYQC 606
GG AA +AARTF++ G A+ + + K A+ +R A K E P+ P + C
Sbjct: 60 GGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTC 119
Query: 607 YG 612
G
Sbjct: 120 VG 121
>At1g63940.2 68414.m07240 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 493
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 GGCEAAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEV---KEHIPSIYPYLYQC 606
GG AA +AARTF++ G A+ + + K A+ +R A K E P+ P + C
Sbjct: 67 GGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTC 126
Query: 607 YG 612
G
Sbjct: 127 VG 128
>At1g63940.1 68414.m07241 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase GB:AAD28178
[Brassica juncea]
Length = 486
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 GGCEAAVHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEV---KEHIPSIYPYLYQC 606
GG AA +AARTF++ G A+ + + K A+ +R A K E P+ P + C
Sbjct: 60 GGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTC 119
Query: 607 YG 612
G
Sbjct: 120 VG 121
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 281 APYKISAI-LSGTLPASIKLTSETILLSKDRPTSPAETLIKSLKCCGDRPSS 129
+PY S+I L+ L +S++++S L+ D+P S + +KC RP S
Sbjct: 772 SPYWFSSISLAADLVSSVRMSSSFDFLNPDKPPSGGSEVHTIMKCICPRPFS 823
>At5g24430.1 68418.m02879 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium/calmodulin-dependent
protein kinase CaMK1 [Nicotiana tabacum]
gi|16904222|gb|AAL30818
Length = 594
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/100 (23%), Positives = 43/100 (43%)
Frame = -1
Query: 401 IPLNIGRTSLQQSLDTMRRSVPPTAIGLIPPSFFIKAHKFAPYKISAILSGTLPASIKLT 222
IP G S Q S + S+P + + P + ++ +P++ S + +G P+ +
Sbjct: 17 IPTGNGEVSNQPSQNHRHASIPQSPVASGTPE--VNSYNISPFQ-SPLPAGVAPSPARTP 73
Query: 221 SETILLSKDRPTSPAETLIKSLKCCGDRPSSPPAEPFLKD 102
P SPA+ ++ +L+ P P EP +D
Sbjct: 74 GRKFKWPFP-PPSPAKPIMAALRRRRGAPPQPRDEPIPED 112
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 515 KSTFTNTSAPPPLRKVRAACTAASQPPFVPTPNCIG 408
K + + PPP++KV A ++AS+PP P G
Sbjct: 262 KGSSPSPPPPPPVKKVGALSSSASKPPPAPVRGASG 297
>At5g19670.1 68418.m02340 exostosin family protein contains Pfam
domain, PF03016: Exostosin family
Length = 600
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 514 LKNAFNCIDRNAFLKEVKEHIPSIYPYLYQCYGNPSKLV 630
++N+ N + FLKE EHI S YP+ + G LV
Sbjct: 335 VRNSHNRTNLRQFLKEYTEHISSKYPFFNRTDGADHFLV 373
>At4g15760.1 68417.m02399 monooxygenase, putative (MO1) similar to
GI:3426062
Length = 348
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 412 IQLGVGTKGGCEAA-VHAARTFLKGGGAEVLVKVDLKNAFNCIDRNAFLKEVKEHIP 579
IQLGVG + ++ +H ART L G + ++ + CI RN ++ + + +P
Sbjct: 7 IQLGVGDRLRLNSSLIHKARTMLIENGKKREFVSNIVDEARCIKRNDLVEALSDALP 63
>At3g19700.1 68416.m02495 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich receptor-like
protein kinase GB:AAC36318 from [Malus domestica];
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 991
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 187 VGRSLLK-SIVSLVNLMLAGSVPDSIADILYGANLCALMKKDGGIRPIAVG 336
VG S LK S++ L N L GSVP+S+ + N K +RP +G
Sbjct: 550 VGLSALKLSLLDLSNNQLTGSVPESLVSGSFEGNSGLCSSKIRYLRPCPLG 600
>At3g11397.1 68416.m01389 prenylated rab acceptor (PRA1) family
protein contains Pfam profile PF03208: PRA1 family
protein
Length = 209
Score = 29.1 bits (62), Expect = 2.7
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 104 LLKTVQQADWMVYPRSISRI*SMFLLVMSGGLYLKV*SRLLI*CWREVYLT-VSLIFCME 280
+++ +++ +W PRS++ S F S ++ SRL C Y T ++F
Sbjct: 11 VIEALREVEWSASPRSLAEFFSRFAFPRSFSKWM---SRLK--CNLYYYRTNYFILFVFV 65
Query: 281 RICVL**RKMAVLGLSLLAVHCAALYPGFAA 373
L R +A+LG +L A+ A L FAA
Sbjct: 66 LGLALITRPLAILGAALTALSLAFLNDSFAA 96
>At1g70370.1 68414.m08095 BURP domain-containing protein /
polygalacturonase, putative similar to polygalacturonase
isoenzyme 1 beta subunit [Lycopersicon esculentum]
GI:170480; contains Pfam profile PF03181: BURP domain
Length = 626
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 529 NCIDRNAFLKEVKEHIPSIYPYL-YQCYGNPSKLVYKESLVE 651
N I+ K V H S+YPYL Y C+ P VY+ L+E
Sbjct: 531 NGINGGKLTKAVSCH-QSLYPYLLYYCHSVPKVRVYEADLLE 571
>At1g66940.2 68414.m07609 protein kinase-related
Length = 309
Score = 29.1 bits (62), Expect = 2.7
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 6/133 (4%)
Frame = -1
Query: 530 LNAFFKSTFTNTSAPP---PLRKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQQSL 360
L +F S FTNT+ PP L + + T Q V PN P IG S+ +S
Sbjct: 101 LGSFCSSVFTNTTLPPETFELSRTYKSVTIFYQCSSV-LPNLSSYTCP-EIGPISVSESP 158
Query: 359 DTMRRSVPPTAIGLIPPSFFIKAHKFAPYKISAILSGTLPASIKL---TSETILLSKDRP 189
+ S + +P SF K + + ++L ++ + T + L S R
Sbjct: 159 EKYPESCRSSFTVKVPTSFDTKEKELNVTNLESVLRKGFEVTVVINENTCQECLSSLGRC 218
Query: 188 TSPAETLIKSLKC 150
E L +KC
Sbjct: 219 HVFNENLTPGVKC 231
>At1g66940.1 68414.m07608 protein kinase-related
Length = 332
Score = 29.1 bits (62), Expect = 2.7
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 6/133 (4%)
Frame = -1
Query: 530 LNAFFKSTFTNTSAPP---PLRKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQQSL 360
L +F S FTNT+ PP L + + T Q V PN P IG S+ +S
Sbjct: 101 LGSFCSSVFTNTTLPPETFELSRTYKSVTIFYQCSSV-LPNLSSYTCP-EIGPISVSESP 158
Query: 359 DTMRRSVPPTAIGLIPPSFFIKAHKFAPYKISAILSGTLPASIKL---TSETILLSKDRP 189
+ S + +P SF K + + ++L ++ + T + L S R
Sbjct: 159 EKYPESCRSSFTVKVPTSFDTKEKELNVTNLESVLRKGFEVTVVINENTCQECLSSLGRC 218
Query: 188 TSPAETLIKSLKC 150
E L +KC
Sbjct: 219 HVFNENLTPGVKC 231
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 191 PTSPAETLIKSLKCCGDRPSSPPAEPFLKDVIVVRTSSRDTRGKVVED 48
PTSPA + L R SSP A D ++R S T +V +D
Sbjct: 5 PTSPAPNRLLRLFSSNKRSSSPTAALLTGDFQLIRHFSAGTAARVAKD 52
>At1g66880.1 68414.m07601 serine/threonine protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 1296
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -1
Query: 530 LNAFFKSTFTNTSAPPPLRKVRAACTAASQPPFVPT-PNCIGRNIPLNIGRTSLQQSLDT 354
L++F TFTNT+ PP + ++ A + + P P+ P+ IG S+ + +
Sbjct: 279 LHSFCSLTFTNTTLPPEIFELSPAYKSVTFYHCYPVLPDLSNYTCPV-IGPISVSGNPED 337
Query: 353 MRRSVPPTAIGLIPPSFFIKAHKFAPYKISAIL 255
P A +P SF K K + ++L
Sbjct: 338 HETCFPNFAAN-VPTSFVTKEKKLNIANLESVL 369
>At1g28220.1 68414.m03464 purine permease, putative similar to
purine permease GI:7620007 from [Arabidopsis thaliana]
Length = 351
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 308 SFFIKAHKFAPYKISAILSGTLPASI 231
SFF+ HKF P+ I+A++ T+ A++
Sbjct: 124 SFFMVKHKFTPFTINAVVLLTVGAAV 149
>At2g12940.1 68415.m01419 expressed protein
Length = 294
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -1
Query: 500 NTSAPPPLRKVRAACTAASQPPFVPTPNCIGRN-IPLNIGRTSLQQSLDTMR----RSVP 336
NT+ P + + +S PP P+P+ RN +PL TS++ +MR +P
Sbjct: 6 NTTPSRPWSITQPSLAFSSLPPLSPSPSSSRRNSLPLMNPSTSMESRDSSMRFKKNSLLP 65
Query: 335 PTAIGLIPP 309
P + I P
Sbjct: 66 PLGVKKIAP 74
>At1g23760.1 68414.m02998 BURP domain-containing protein /
polygalacturonase, putative similar to polygalacturonase
isoenzyme 1 beta subunit [Lycopersicon esculentum]
GI:170480; contains Pfam profile PF03181: BURP domain
Length = 622
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 529 NCIDRNAFLKEVKEHIPSIYPYL-YQCYGNPSKLVYKESLVE 651
N I+ K V H S+YPYL Y C+ P VY+ L++
Sbjct: 527 NGINGGRVTKSVSCH-QSLYPYLLYYCHSVPKVRVYESDLLD 567
>At4g08960.1 68417.m01476 phosphotyrosyl phosphatase activator
(PTPA) family protein similar to Protein phosphatase 2A,
regulatory subunit B' (PP2A, subunit B', PR53 isoform)
(Phosphotyrosyl phosphatase activator) (PTPA)
(Swiss-Prot:Q28717) [Oryctolagus cuniculus]
Length = 392
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 556 KEVKEHIPSIYPYLYQCYGNPSKLVY 633
+E KE + I PY + +GN S++ Y
Sbjct: 199 EEFKESVIEIVPYFFDSFGNSSRIDY 224
>At4g00450.1 68417.m00062 expressed protein
Length = 2124
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 377 SLQQSLDTMRRSVPPTAIGLIPPS 306
SL+ SL SVPPTA+ L+ PS
Sbjct: 1999 SLRCSLSCQPHSVPPTALTLVQPS 2022
>At2g18760.1 68415.m02184 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|Q03468 Excision
repair protein ERCC-6 (Cockayne syndrome protein CSB)
{Homo sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1187
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 49 SSTTLPRVSLDDVLTTITSFKNGSAGGLDGLS-PQHFKDLINVSAGDVGRSLLKSIVSL 222
SS+ + + + ++ I SF G D S HF+D+++ + + ++LLK I +L
Sbjct: 1112 SSSRVGSLQPEVLIRKICSFVQQKGGSADTTSIVNHFRDIVSFNDKQLFKNLLKEIATL 1170
>At5g12940.1 68418.m01484 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 371
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 184 DVGRSLLKSIVSLVNLMLAGSVPDSIADILYGANLCALMKKDGGIRPIAVG 336
D+GR + S V L ++G +PDS+ I A+L M + G P + G
Sbjct: 201 DIGRLKMVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNRLTGPIPASFG 251
>At2g28380.1 68415.m03449 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 434
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 485 PPLRKVRAACTAASQPPFVPTPNCIGRNIPLNIGRTSLQQSLDTMRRSVPPTAIGLIPPS 306
PP+ +R A S PP P P +P ++ SL ++ + R PP I P
Sbjct: 290 PPVT-IRTAVPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPV-RIAPPVTIRTAVPV 347
Query: 305 F 303
F
Sbjct: 348 F 348
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,465,773
Number of Sequences: 28952
Number of extensions: 361760
Number of successful extensions: 1185
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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