Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0836
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0737 - 13529180-13529543,13530661-13531178 31 1.2
12_02_0001 - 12066231-12066341,12066745-12066825,12067056-120671... 29 3.8
11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793 29 3.8
08_02_1319 + 26117353-26117784 29 3.8
07_03_0091 + 13312904-13313647 29 5.0
07_01_0304 + 2177044-2177046,2177173-2177235,2177323-2177460,217... 29 5.0
10_08_0100 + 14788426-14789097 28 6.6
08_02_0494 + 17774040-17774064,17774581-17774651,17774733-17775785 28 6.6
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 28 6.6
01_03_0234 - 14051013-14051042,14051723-14051912,14052127-14052383 28 6.6
01_03_0104 - 12598165-12598257,12598568-12598627,12598958-12600124 28 6.6
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 6.6
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 28 8.7
01_05_0724 - 24612712-24612852,24612985-24613038,24613340-246134... 28 8.7
01_04_0082 + 15835137-15836312 28 8.7
01_03_0107 - 12613491-12613538,12613906-12614139,12614682-126147... 28 8.7
>02_02_0737 - 13529180-13529543,13530661-13531178
Length = 293
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 295 PLPGRK---ENPLPRE-SARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 462
PL GR+ +P PR R P PR PS CQ A PSR ALPS
Sbjct: 70 PLQGRRPAESSPQPRPPQVRRPQPPRRHRSTAPSSSSCQFQ----AAAPSRPPSALPSPT 125
Query: 463 PSRQT 477
S T
Sbjct: 126 ASSST 130
>12_02_0001 - 12066231-12066341,12066745-12066825,12067056-12067136,
12068017-12068097,12068337-12068417,12068492-12068572,
12068647-12068727,12070748-12070828,12070903-12070983,
12071551-12071631,12072036-12072116,12072519-12072599,
12072839-12072919,12073468-12073548,12074108-12074188,
12074428-12074508,12075076-12075156,12075396-12075476,
12075561-12075641,12076356-12076436,12076676-12076756,
12077326-12077406,12077811-12077891,12078131-12078211,
12078286-12078366,12079586-12079666,12079906-12079986,
12081341-12081421,12081793-12081873,12083074-12083154,
12083714-12083794,12084034-12084114,12084354-12084434,
12084674-12084754,12084829-12084909,12084984-12085064,
12085304-12085384,12087109-12087189,12087429-12087509,
12087584-12087664,12089204-12089284,12090339-12090419,
12090659-12090739,12091621-12091701,12092754-12092834,
12093074-12093154,12093155-12093310,12093550-12093630,
12094454-12094512,12094610-12094691,12096312-12096392,
12096789-12096869,12097768-12097907,12099296-12099377,
12100185-12100265,12100999-12101079,12101484-12101564,
12101814-12101894,12102628-12102708,12103744-12103824,
12104869-12104949,12105189-12105269,12105509-12105589,
12106322-12106402,12106477-12106557,12107448-12107528,
12108050-12108145,12109578-12109584,12110097-12110293
Length = 1929
Score = 29.1 bits (62), Expect = 3.8
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
Frame = -1
Query: 670 HMDLYWYLYLFVYGGKEQGTCTGNLYGVRYFLLYWVRSGHVHFDWNMNF-LFNGVRFWHI 494
H+ +YW +F G KE +YG + +YWV G + F F + + HI
Sbjct: 781 HIGVYWVGAMFFTGMKEFKKHQNMIYG--HIGVYWV--GAMFFTGMKKFKKHQNMIYGHI 836
Query: 493 YLDGDGSVDWDMYWVRHLLFDWVGLRYVNWYLDNLFN-----WVRDMFDNGVGLGNVHFH 329
+YWV + F G++ N + + +F WV MF G+ H +
Sbjct: 837 ----------GVYWVGAMFF--TGMKKFNEHQNVIFGHIGEYWVGAMFFTGMKKFKKHQN 884
Query: 328 GV-GDFLFYRVGDVLFDGVGN-RNFLNDSYGFV 236
+ G Y VG + F G+ + N YG +
Sbjct: 885 KIFGHIGEYWVGAMFFTGMKKFKKHQNMIYGHI 917
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = -1
Query: 670 HMDLYWYLYLFVYGGKEQGTCTGNLYGVRYFLLYWVR----SGHVHFDWNMNFLFNGVR- 506
H+D+YW +F G K+ +YG + +YWV +G F + N +F +
Sbjct: 365 HIDVYWVGAMFFTGMKKFNKHQNMIYG--HIGVYWVGAMFFTGMKKFKKHQNMIFGHIGV 422
Query: 505 FWHI 494
+W I
Sbjct: 423 YWSI 426
>11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793
Length = 576
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +1
Query: 271 SLPRRKAHPLPGRKENPLPRESARSP---TLPRCQTCPLPS*RDC 396
S R++ P P +K P P + P R CPLP+ R C
Sbjct: 528 STARKRTRP-PSKKPKPDPEATTSEPWGLRFARANNCPLPAPRSC 571
>08_02_1319 + 26117353-26117784
Length = 143
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 361 CQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTL 510
C PL D +GTS L ++ + P TCP++ RP +RT+
Sbjct: 76 CTGKPLEMLLD-RGTSKPDKYLKAKSDSVRPRTCPAKSGRPPGASSSRTV 124
>07_03_0091 + 13312904-13313647
Length = 247
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/69 (27%), Positives = 24/69 (34%)
Frame = +1
Query: 277 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 456
P KA P P K P P S P+ + P PS + + P K P
Sbjct: 166 PSPKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPDPKPEPKPQ 225
Query: 457 TCPSRQTRP 483
PS+ P
Sbjct: 226 PEPSQPKLP 234
>07_01_0304 +
2177044-2177046,2177173-2177235,2177323-2177460,
2177886-2178778,2178935-2179005,2179132-2179234,
2180017-2180092,2180870-2180977
Length = 484
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 669 WDRPYPVHIPKPVPYPVEKP 728
W P P +PKP+P P +P
Sbjct: 332 WQEPPPAKLPKPLPVPDSEP 351
>10_08_0100 + 14788426-14789097
Length = 223
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 325 PRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 462
PR A SP PR C DCQ + R+A P+R + C
Sbjct: 178 PRRPAPSPASPRLPMCSYTCTVDCQTRNVRSA--PTRPSSSTDGGC 221
>08_02_0494 + 17774040-17774064,17774581-17774651,17774733-17775785
Length = 382
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 526 FLFNGVRFWHIYLDGDGSVDWD 461
F+ NG + H+++DG S+ WD
Sbjct: 132 FISNGTLYHHLHVDGPVSLSWD 153
>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
Length = 637
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 235 PQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS-*RDCQGTSS 411
P N+N + + R + + G P P++ ARSP L R +P ++ + +S
Sbjct: 210 PSNKNMLVADAAA--RSSSLKVAGEGPKPKPKQRARSPPLRR----DVPELFKEAKSSSK 263
Query: 412 RTATLPSRKEGALPSTCPSR 471
R +T P R++ + P PSR
Sbjct: 264 RFSTPPPRRKPSSP-PAPSR 282
>01_03_0234 - 14051013-14051042,14051723-14051912,14052127-14052383
Length = 158
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -1
Query: 562 RSGHVHFDW--NMNFLFNGVRFWHIYLDGDGSVDWDMYW 452
+SGH+ W +MNFLF RF L G+ D W
Sbjct: 66 QSGHIREKWYTSMNFLFEDTRFNGSMLQVMGTTPQDDQW 104
>01_03_0104 - 12598165-12598257,12598568-12598627,12598958-12600124
Length = 439
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 658 YWYLYLFVYGGKEQGTCTGNLYGVRYFLLYWVRSGHVHFDW-NMNFL 521
Y+Y+ + + G CT + + + LL + R G H+ W N+N L
Sbjct: 196 YFYMRVVLSADPSSGNCTVMILHLLHNLLSFARVGATHWTWINVNEL 242
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 277 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPL 378
PRR A P GR +P P S RSP PR P+
Sbjct: 229 PRRSASPPNGRNRSPTPNAS-RSPA-PRDSRSPM 260
>04_03_0795 -
19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 348 NPTPLSNMSLTQLKR---LSRYQFTYRNPTQSKRRCLTQYMSQSTDPSPSRYM 497
N LSN L+Q++R L +Y Y + + L QY+ TDPS S ++
Sbjct: 675 NLMSLSNYMLSQMQRMEFLQKYPLVYTSLQLIQPCHLLQYIVHLTDPSRSMFI 727
>01_05_0724 -
24612712-24612852,24612985-24613038,24613340-24613429,
24613499-24613780,24613926-24614119,24614379-24614508,
24614610-24614690,24614766-24614891,24615019-24615076,
24615319-24615380,24615753-24615803,24615946-24616065,
24616280-24616403,24616832-24616920,24617304-24617396,
24617910-24618063,24618673-24619178
Length = 784
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 295 PLPGRKENPLPRESARSPTLPRCQTCPLP 381
PLP R+ PLP SA P + PLP
Sbjct: 16 PLPPRRRLPLPSSSASFPRAGHHRRLPLP 44
>01_04_0082 + 15835137-15836312
Length = 391
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 577 LLYWVRSGHVHFDWNM 530
LL W R G+ H DWN+
Sbjct: 282 LLVWARDGYPHGDWNL 297
>01_03_0107 -
12613491-12613538,12613906-12614139,12614682-12614713,
12616021-12616176,12617972-12618159,12618242-12618324,
12618821-12618976,12620320-12621162,12621197-12621550,
12621962-12623125
Length = 1085
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 658 YWYLYLFVYGGKEQGTCTGNLYGVRYFLLYWVRSGHVHFDW-NMNFL 521
Y+Y + + G CT + + LL++ R G H+ W N+N L
Sbjct: 194 YFYTRVVLSADPSSGNCTVMILHLLRNLLFFARVGDTHWTWINVNEL 240
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,527,599
Number of Sequences: 37544
Number of extensions: 377819
Number of successful extensions: 1450
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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