Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0836
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 34 0.10
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 31 1.3
SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8) 31 1.3
SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4) 30 1.7
SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8) 30 1.7
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 30 2.2
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 30 2.2
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 30 2.2
SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_16712| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 5.1
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 28 6.7
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 28 6.7
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 28 8.9
SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06) 28 8.9
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 35.5 bits (78), Expect = 0.044
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 259 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 438
+++ +LP K + LP S + PT P+ T PS + T TATLPS K
Sbjct: 240 QTTTTLPSTKQPTTTQQTTTTLP--STKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTK 297
Query: 439 EGA----LPSTCPSRQTRP 483
+ +T P+ T+P
Sbjct: 298 QPTTTQQTTATLPTPSTKP 316
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 259 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 438
+++ +LP K + +P S + PT + T LPS + T T TLPS K
Sbjct: 208 QTTTTLPSTKQPTTTQQTTTTIP--STKQPTTTQQTTTTLPSTKQPTTTQQTTTTLPSTK 265
Query: 439 EGALP----STCPSRQTRPRQGICARTLP 513
+ P +T PS + TLP
Sbjct: 266 QPTTPQLTTTTFPSTKQPTTTQQTTATLP 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 259 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 438
+++ +LP K P P S + PT + T LPS + T TATLP+
Sbjct: 256 QTTTTLPSTKQPTTPQLTTTTFP--STKQPTTTQQTTATLPSTKQPTTTQQTTATLPTPS 313
Query: 439 EGALPSTCPSRQTRP 483
+ +RQ P
Sbjct: 314 TKPTTVSPTTRQPPP 328
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 34.3 bits (75), Expect = 0.10
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = -1
Query: 592 GVRYFLLYWVRSGHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLLFDWVGLRY 413
G+ + ++ WV GH DW L + V W + L G VDW + HL+ DWVGL +
Sbjct: 786 GLGHSVVDWVGLGHSVVDWVG--LGHSVVDW-VGL-GHSVVDW--VGLGHLVVDWVGLGH 839
Query: 412 --VNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFL--FYRVGDVLFDGVGNRNFLNDSY 245
V+W L + V D G+G V + G+G+ + + +G + D VG N + D
Sbjct: 840 SVVDWV--GLGHSVVDYV--GLGHSVVDYVGLGNSVVDWVGLGHSVVDWVGLGNSVLDWV 895
Query: 244 G 242
G
Sbjct: 896 G 896
Score = 30.3 bits (65), Expect = 1.7
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Frame = -1
Query: 616 GTCTGNLYGVRYFLLYWVRSGHVHFDWNMNFLFNGVRFWHIYLDGDGSVDW--------D 461
G + G+ + ++ WV GH DW L N V W + L G VDW D
Sbjct: 638 GHSVADWVGLGHSVVDWVGLGHSVVDW--VGLGNSVVEW-VGL-GHSIVDWVELGNSVVD 693
Query: 460 MYWVRHLLFDWVGLRY--VNWY-LD-NLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVG 296
+ H + DWVGL + V W LD ++ +WV G+G V + G+G + VG
Sbjct: 694 CVGLGHSVVDWVGLGHSVVGWVGLDHSVVDWV------GLGNSVVEWVGLGHSVVDWVG 746
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +1
Query: 262 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 441
S S P + HP P NP P S P P PS S ++ PS +
Sbjct: 468 SPISNPSPRPHPSPHPSSNPSPNPSPN----PSSDPSPNPSSNPSSDPSPNPSSNPSSEP 523
Query: 442 GALPSTCPSRQTRP 483
P + PS T P
Sbjct: 524 SPNPISNPSISTSP 537
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -3
Query: 383 LGKGHV*QRGRVGERALSRGRGFSFLPGRGCAFRRGR 273
L KG V +GR+G R RGRG + PGRG RGR
Sbjct: 83 LNKGSV--QGRLGARG--RGRGMARGPGRGMVGARGR 115
>SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8)
Length = 1007
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V V
Sbjct: 197 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYSWVSVATYSLVSV 256
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 257 ATYNWVSVATYSWVSV 272
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 5 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 64
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 65 ATYNWVSVATYNWVSV 80
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 21 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 80
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 81 ATYNWVSVATYNWVSV 96
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 37 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 96
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 97 ATYNWVSVATYNWVSV 112
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 53 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 112
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 113 ATYNWVSVATYNWVSV 128
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 69 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 128
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 129 ATYNWVSVATYNWVSV 144
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 85 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 144
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 145 ATYNWVSVATYNWVSV 160
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 101 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 160
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 161 ATYNWVSVATYNWVSV 176
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 117 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 176
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 177 ATYNWVSVATYNWVSV 192
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 133 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 192
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 193 ATYNWVSVATYNWVSV 208
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 149 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 208
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 209 ATYNWVSVATYNWVSV 224
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 275
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 165 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 224
Query: 274 GNRNFLN-DSYGFVDL 230
N+++ +Y +V +
Sbjct: 225 ATYNWVSVATYNWVSV 240
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGL 347
WV + WV + +W +NWV DN V +
Sbjct: 285 WVSVATYSWVSVATYSWVSVATYNWVSVATDNWVSV 320
>SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 367 FDNGVGLGNVHFHGVGDFLFYRVGDVLFDGVGN 269
FD+G+G+G H H YRV DV +DG G+
Sbjct: 793 FDDGIGVGIAHNH-------YRVSDVDYDGAGS 818
>SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4)
Length = 369
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = -3
Query: 515 RGKVLAHIP*RG----RVCRLGHVLGKAPSFR--LGRVAVRELVP*QSL*LGKGH--V*Q 360
RGKV +P RG RV G V + P+ GRV +E V + GK + V
Sbjct: 101 RGKVYGRVPARGKVYGRVPTYGKVYERVPARGKVYGRVPTQEKVYERVPARGKVNWRVPV 160
Query: 359 RGRVGERALSRGRGFSFLPGRGCAFRR 279
RG+V R +RG+ + +P RG + R
Sbjct: 161 RGKVYWRVPARGKVYGRVPARGKVYGR 187
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 452 GKAPSFRL-GRVAVRELVP*QSL*LGK-GHV*QRGRVGERALSRGRGFSFLPGRGCAFRR 279
G+ FR+ G V E V + GK GHV RG+V R +RG+ + +P G + R
Sbjct: 68 GRVTPFRVYGHVPTHERVSRRVHTHGKYGHVPARGKVYGRVPARGKVYGRVPTYGKVYER 127
>SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8)
Length = 627
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Frame = +1
Query: 271 SLPRRKAHPLPG--RKENPLPRESARSPTLPRCQTC--PLPS*RDCQGTSSRTATLPS-- 432
+LPR + LP + + LPR R TLPR TC LP +R TLP
Sbjct: 266 TLPRTRLDTLPRVVTRLDTLPRVVTRLDTLPRVVTCLDTLPR------VGTRLDTLPRIV 319
Query: 433 RKEGALPSTCPSRQTRPRQGICARTLP 513
+ LP T PR G TLP
Sbjct: 320 TRLDTLPRVVTRLDTLPRVGTRLDTLP 346
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 295 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 441
P P R NP P +A P+ PR + P P +G S +A PS E
Sbjct: 846 PTPLRPTNPTPAHAASKPSNPR-PSNPTPKHAMGEGVSDNSAEPPSPGE 893
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 229 GGPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 408
GG R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 1392 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 1450
Query: 409 SRTATL---PSRKEGALPSTCPSRQTRPRQGICAR 504
++ + L + + AL ++ ++ P+ + ++
Sbjct: 1451 AKPSKLRLDAPKPQSALVTSTKTKAVEPQSVMASK 1485
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 229 GGPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 408
GG R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 263 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 321
Query: 409 SRTATL---PSRKEGALPSTCPSRQTRPRQGICAR 504
++ + L + + AL ++ ++ P+ + ++
Sbjct: 322 AKPSKLRLDAPKPQSALVTSTKTKAVEPQSVMASK 356
>SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 265 SCSLPR--RKAHPLPGRKENPLPRESARSPTLPRCQT 369
+C LPR R + P PGR NP R + +P C T
Sbjct: 4 TCYLPREIRSSSPSPGRSANPHCRYNESNPRTQGCAT 40
>SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 274 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 453
+PR +P P +NP PR + ++P +PR P PS S + PS +G+ P
Sbjct: 52 IPRVTKNPFPRVTKNPFPRVT-KNP-IPRVTKEPHPSCDQRSHPSCDQGSHPSCDQGSHP 109
Query: 454 S 456
S
Sbjct: 110 S 110
>SB_16712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 529
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 605 RTCALLLTPVYKEVQVPVKVHV 670
R C LLL VY E +VP+K H+
Sbjct: 153 RDCVLLLATVYVEGEVPIKEHL 174
>SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 277 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 456
P + HP PG P+ + +P +PR T PLP ++ SRT+T PS + PS
Sbjct: 141 PSFQDHPGPGVMPQMPPQMAPGTPLMPRIPTPPLP--QNMGLGLSRTST-PSPELRVSPS 197
Query: 457 TCPSRQTRPRQ 489
P+ +T Q
Sbjct: 198 --PTLKTESTQ 206
>SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -1
Query: 454 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRV 299
W R + W + WY + W R M D G+ ++G +YRV
Sbjct: 77 WYRVTIDQWYRVTIDQWYRVTIDQWYRVMIDQWYGVTIDQWYGATIDQWYRV 128
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 295 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 453
PLP + PLP + + P P PLP + G+ + S K+ LP
Sbjct: 450 PLPSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLP 502
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Frame = +3
Query: 585 LTP*RFPVHVPCSLPPYTKRYKY-----Q*RSMWDRPYPVHIPKP-----VPYPV 719
+ P +PV VP PP +R+ Y + + PYP++I P VPYPV
Sbjct: 486 IKPMPYPVPVPVRQPPMIQRFYYPVPVSRPGQIHHIPYPIYIRGPAEVRHVPYPV 540
>SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 358 RCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ-TRPRQG 492
RC T + + + TS TA R+ + PST PSRQ + PR G
Sbjct: 9 RCDTGRETAPTESRATSLSTAGFCGRRSRSPPSTRPSRQGSAPRTG 54
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 HPLPGRKE-NPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 459
HP P +++ +P P + R P + Q P PS + Q S+ P + P T
Sbjct: 202 HPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRHNQQQTPET 258
>SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 298 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 477
LP R N SP T PLP + TS+ +P+ +G + +T PS+Q+
Sbjct: 298 LPPRSSNEASETVIDSPL-----TDPLPDEEGGKVTSNEEEVVPAVSQGVVEATSPSQQS 352
Query: 478 RPRQGIC 498
G C
Sbjct: 353 LHDFGEC 359
>SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 350
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 411 TYRNPTQSKRRCLTQYMSQSTDPSPSRYMCQNLTPLKRKFMFQSKCTC 554
T R +QS+R C + S S P+P+R L P+ + + + K TC
Sbjct: 307 TIRRQSQSRRNCYSVISSNSPSPAPNR----RLLPINEEALIE-KETC 349
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +1
Query: 589 PRKGSPYMCLAPYPRIQRGTSTS-KGPCGIDPTPCIFPNQCLTPSRSP 729
P P L P P ++ T GP P + PN C PS P
Sbjct: 440 PSAPPPATALVPNPLLRPQCPTPCYGPSAQPPATALVPNPCYVPSAQP 487
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 678 PYPVHIPKPVPYPVEKP 728
P P++IP PVP PV +P
Sbjct: 122 PLPMYIPVPVPQPVPQP 138
>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
Length = 406
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +3
Query: 600 FPVHVPCSLPP-YTKRYKYQ*RSMWDRPYPVHIPKPVPYPVEKP 728
+P P S P Y Y + + YP P P PYP P
Sbjct: 67 YPSSYPASYPASYPASYPASYPASYPASYPTSYPYPSPYPAPYP 110
>SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06)
Length = 673
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 345 PNPTPLSNMSLTQLKRLSRYQF 410
PNP P +NM+ +LK RY++
Sbjct: 524 PNPCPSTNMTCVELKGTPRYRY 545
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,270,868
Number of Sequences: 59808
Number of extensions: 401606
Number of successful extensions: 1424
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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