Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0836
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 35 0.26
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.45
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.45
AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens ... 34 0.60
BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongatio... 31 4.2
AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor El... 31 4.2
BC122524-1|AAI22525.1| 134|Homo sapiens putative protein produc... 31 5.6
BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongatio... 31 5.6
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 30 7.4
AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens ... 30 7.4
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 30 7.4
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 30 7.4
BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology... 30 9.8
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ... 30 9.8
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein. 30 9.8
AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein. 30 9.8
AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein. 30 9.8
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein. 30 9.8
AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein. 30 9.8
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 35.1 bits (77), Expect = 0.26
Identities = 26/72 (36%), Positives = 29/72 (40%)
Frame = +1
Query: 298 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 477
LP P PR TLP T P P GT TLP+ + P T PS +T
Sbjct: 220 LPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRT 279
Query: 478 RPRQGICARTLP 513
P RTLP
Sbjct: 280 LP----TPRTLP 287
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/69 (33%), Positives = 27/69 (39%)
Frame = +1
Query: 298 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 477
LP + P P S TLP T P P GT TLP+ P T P+ +T
Sbjct: 226 LPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRT 285
Query: 478 RPRQGICAR 504
P G R
Sbjct: 286 LPTPGTLPR 294
Score = 31.1 bits (67), Expect = 4.2
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 SLPRRKAHPLPGRKENPLPRESARSP--TLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG 444
+LP + P PG LP P T+P T P P T TLPS +
Sbjct: 225 TLPPPRTLPSPGT----LPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTL 280
Query: 445 ALPSTCPSRQTRPRQG 492
P T P+ T PR G
Sbjct: 281 PTPRTLPTPGTLPRPG 296
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.45
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 274 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 453
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 454 STCPS 468
+ CPS
Sbjct: 483 APCPS 487
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.45
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 274 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 453
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 454 STCPS 468
+ CPS
Sbjct: 483 APCPS 487
>AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ46197 fis, clone TESTI4007565. ).
Length = 140
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 250 CR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLP 381
CR S C P + P PG + P + PT RC+ P P
Sbjct: 10 CRLPSCCPCPCKTGDPGPGNRRRATPMWMPKGPTQERCRPYPPP 53
>BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 31.1 bits (67), Expect = 4.2
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 229 GGPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 399
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 400 GTSSRTATLPSRK--EGALPSTCPSR-QTRPRQG 492
+ +RTA LP + E A P P R T QG
Sbjct: 170 ASPTRTAPLPMPEGPEPAAPGKQPGRGHTHAAQG 203
>AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor
Elongin A2 protein.
Length = 753
Score = 31.1 bits (67), Expect = 4.2
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 229 GGPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 399
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 400 GTSSRTATLPSRK--EGALPSTCPSR-QTRPRQG 492
+ +RTA LP + E A P P R T QG
Sbjct: 170 ASPTRTAPLPMPEGPEPAAPGKQPGRGHTHAAQG 203
>BC122524-1|AAI22525.1| 134|Homo sapiens putative protein product
of Nbla00301 protein.
Length = 134
Score = 30.7 bits (66), Expect = 5.6
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Frame = +1
Query: 280 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD-------CQGTS-SRTATLPSR 435
R ++ P PG L S R P P QT PS CQ S +R A LP+R
Sbjct: 6 RNQSSPPPG----DLHFRSLRLPVTPERQTADWPSCLKTQPDSDACQPASPTRAAALPTR 61
Query: 436 KEGALPSTCP-SRQTRPRQGI 495
G P CP + ++R GI
Sbjct: 62 MGGTTPPRCPRAERSRGSTGI 82
>BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 30.7 bits (66), Expect = 5.6
Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +1
Query: 229 GGPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 399
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 400 GTSSRTATL--PSRKEGALPSTCPSR-QTRPRQG 492
+ +RTA L P E A P P R T QG
Sbjct: 170 ASPTRTAPLRMPEGPEPAAPGKQPGRGHTHAAQG 203
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 295 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 462
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 128
>AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ41197 fis, clone BRACE2045947. ).
Length = 221
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 328 RESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG---ALPSTCPSRQ 474
R + + P CQ CP PS T SR ++ P R G ALP R+
Sbjct: 114 RRQRPAASRPHCQQCPWPSEPRRSSTPSRPSSTPPRPAGQGQALPQILIGRE 165
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 295 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 462
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 128
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
a variant protein.
Length = 1474
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 295 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 462
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 110 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 163
>BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology
domain containing 1 protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 295 PLPGR--KENPLPRESARSPTLPRCQTCPLP 381
P PGR +E+P P++ P+ P Q PLP
Sbjct: 326 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 356
>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
FLJ43332 fis, clone NT2RI3006340, highly similar to
Myomesin 1. ).
Length = 1685
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 277 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 393
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
Length = 1685
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 277 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 393
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +1
Query: 280 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 459
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 767 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826
Query: 460 ----CPSRQTRPRQGICARTLP 513
PS T PR + A P
Sbjct: 827 PLPAGPSSCTSPRSPLPAPPRP 848
>AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +1
Query: 280 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 459
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 767 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826
Query: 460 ----CPSRQTRPRQGICARTLP 513
PS T PR + A P
Sbjct: 827 PLPAGPSSCTSPRSPLPAPPRP 848
>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
Length = 1015
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +1
Query: 280 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 459
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 879 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 938
Query: 460 ----CPSRQTRPRQGICARTLP 513
PS T PR + A P
Sbjct: 939 PLPAGPSSCTSPRSPLPAPPRP 960
>AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein.
Length = 797
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 295 PLPGR--KENPLPRESARSPTLPRCQTCPLP 381
P PGR +E+P P++ P+ P Q PLP
Sbjct: 344 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,582,296
Number of Sequences: 237096
Number of extensions: 2086366
Number of successful extensions: 6580
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6538
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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