BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0836
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 2.9
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 9.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.0
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 608 TCALLLTPVYKEVQVPVKVHV 670
TCAL LTP Y V + +V
Sbjct: 183 TCALDLTPTYAVVSSSISFYV 203
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +3
Query: 633 YTKRYKYQ*RSMWDRPYPVHIPKPVPYPV 719
Y Y + ++ Y IP PVP P+
Sbjct: 96 YNNNNNYNKKLYYNINYIEQIPVPVPVPI 124
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 107 YIEQIPVPVPFPV 119
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 107 YIEQIPVPVPFPV 119
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 107 YIEQIPVPVPFPV 119
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 107 YIEQIPVPVPFPV 119
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 335 LSRGRGFSFLPGRGCAFRRGREQELS*RQLRFC 237
L +G G +LP GC + G + ++ ++ C
Sbjct: 233 LCKGDGKWYLPSGGCHCKPGYQADVEKQECTEC 265
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 340 YIEQIPVPVPFPV 352
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 340 YIEQIPVPVPFPV 352
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 340 YIEQIPVPVPFPV 352
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 340 YIEQIPVPVPFPV 352
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 681 YPVHIPKPVPYPV 719
Y IP PVP+PV
Sbjct: 329 YIEQIPVPVPFPV 341
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +3
Query: 633 YTKRYKYQ*RSMWDRPYPVHIPKPVPYPV 719
Y Y + ++ Y IP PVP P+
Sbjct: 334 YNNNNNYNKKLYYNINYIEQIPVPVPVPI 362
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,686
Number of Sequences: 438
Number of extensions: 4449
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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