Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0834
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.49 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 295 VYSPSNLPWNAIGRGSVYFPGCKKFH 218
           V S  N+P   I  G  YFPG  +FH
Sbjct: 739 VESNRNVPQKCIFNGQAYFPG-SRFH 763


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 606 VLKSKTITLSRTPVVGIAS*ATQDYVRKKNLL 511
           VL  + +TL  TP VG+ S    D+++  N L
Sbjct: 682 VLLWEIVTLGGTPYVGVHSSELLDFLKSGNRL 713


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 473 TLSQTCYVCAYN 438
           TLS+ CY C YN
Sbjct: 68  TLSKACYDCPYN 79


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 521 KIYSNE*INMVSYIVMTLSQTCYV 450
           K+Y    + +  YI   LS TCYV
Sbjct: 126 KVYQAPVLQLFLYIFTYLSVTCYV 149


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 250 SVYFPGCKKFHGNRFRCVSHL 188
           S + PGC K +G      +HL
Sbjct: 316 SCHIPGCGKVYGKTSHLKAHL 336


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 265 AIGRGSVYFPGCKKFHGNRF 206
           AI R   YFP  +KF   RF
Sbjct: 382 AIHRDPQYFPDPEKFDPERF 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,859
Number of Sequences: 336
Number of extensions: 4250
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)