Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0834
         (741 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo...    30   0.40 
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces...    26   6.5  

>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 350

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -1

Query: 126 TAGQNGHTYILTKNSIKFI 70
           TA Q+GH YI+ KNS+K++
Sbjct: 117 TAKQHGHVYIMLKNSLKWL 135


>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3699

 Score = 25.8 bits (54), Expect = 6.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 500  INMVSYIVMTLSQTCYVCAYNINLPIHILKYV 405
            +N    ++ TL  +   CA  + LP H++KY+
Sbjct: 2519 VNNRPNVISTLVSSFVKCAAKLELPPHLVKYL 2550


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,144,346
Number of Sequences: 5004
Number of extensions: 67452
Number of successful extensions: 140
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)