Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0834
         (741 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052577-1|AAH52577.1|  963|Homo sapiens phosphofurin acidic clu...    39   0.022
BC010096-1|AAH10096.1|  963|Homo sapiens phosphofurin acidic clu...    39   0.022
AY320283-1|AAQ67682.1|  963|Homo sapiens endosome-TGN sorting co...    39   0.022
AK096644-1|BAC04831.1|  829|Homo sapiens protein ( Homo sapiens ...    39   0.022
BC065220-1|AAH65220.2|  889|Homo sapiens phosphofurin acidic clu...    38   0.029
BC050351-1|AAH50351.2|  889|Homo sapiens phosphofurin acidic clu...    38   0.029
AY320284-1|AAQ83882.2|  889|Homo sapiens PACS2 protein.                38   0.029
AB011174-1|BAA25528.1|  962|Homo sapiens KIAA0602 protein protein.     38   0.029

>BC052577-1|AAH52577.1|  963|Homo sapiens phosphofurin acidic
           cluster sorting protein 1 protein.
          Length = 963

 Score = 38.7 bits (86), Expect = 0.022
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PV M L+A WEVDR+ S+C+PR
Sbjct: 98  PVQMNLYATWEVDRSSSSCVPR 119


>BC010096-1|AAH10096.1|  963|Homo sapiens phosphofurin acidic
           cluster sorting protein 1 protein.
          Length = 963

 Score = 38.7 bits (86), Expect = 0.022
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PV M L+A WEVDR+ S+C+PR
Sbjct: 98  PVQMNLYATWEVDRSSSSCVPR 119


>AY320283-1|AAQ67682.1|  963|Homo sapiens endosome-TGN sorting
           connector protein.
          Length = 963

 Score = 38.7 bits (86), Expect = 0.022
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PV M L+A WEVDR+ S+C+PR
Sbjct: 98  PVQMNLYATWEVDRSSSSCVPR 119


>AK096644-1|BAC04831.1|  829|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39325 fis, clone OCBBF2015334, highly similar to
           Rattus norvegicus cytosolic sorting protein PACS-1a
           (PACS-1) ).
          Length = 829

 Score = 38.7 bits (86), Expect = 0.022
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PV M L+A WEVDR+ S+C+PR
Sbjct: 98  PVQMNLYATWEVDRSSSSCVPR 119


>BC065220-1|AAH65220.2|  889|Homo sapiens phosphofurin acidic
           cluster sorting protein 2 protein.
          Length = 889

 Score = 38.3 bits (85), Expect = 0.029
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PVPM LFA WEVD +  +C+PR
Sbjct: 19  PVPMNLFATWEVDGSSPSCVPR 40


>BC050351-1|AAH50351.2|  889|Homo sapiens phosphofurin acidic
           cluster sorting protein 2 protein.
          Length = 889

 Score = 38.3 bits (85), Expect = 0.029
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PVPM LFA WEVD +  +C+PR
Sbjct: 19  PVPMNLFATWEVDGSSPSCVPR 40


>AY320284-1|AAQ83882.2|  889|Homo sapiens PACS2 protein.
          Length = 889

 Score = 38.3 bits (85), Expect = 0.029
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PVPM LFA WEVD +  +C+PR
Sbjct: 19  PVPMNLFATWEVDGSSPSCVPR 40


>AB011174-1|BAA25528.1|  962|Homo sapiens KIAA0602 protein protein.
          Length = 962

 Score = 38.3 bits (85), Expect = 0.029
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 209 PVPMKLFAAWEVDRTPSNCIPR 274
           PVPM LFA WEVD +  +C+PR
Sbjct: 77  PVPMNLFATWEVDGSSPSCVPR 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,955,880
Number of Sequences: 237096
Number of extensions: 2306543
Number of successful extensions: 4233
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4233
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)