Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0834
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119444-1|AAM50098.1| 1133|Drosophila melanogaster AT03104p pro... 58 1e-08
AE014297-3436|AAN13968.1| 1175|Drosophila melanogaster CG5405-PB... 58 1e-08
AE014297-3435|AAF56220.3| 1175|Drosophila melanogaster CG5405-PA... 58 1e-08
AE014297-3434|AAN13970.2| 1133|Drosophila melanogaster CG5405-PC... 58 1e-08
AY075562-1|AAL68369.1| 343|Drosophila melanogaster RH68403p pro... 30 3.8
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 30 3.8
AF241834-1|AAF64492.1| 343|Drosophila melanogaster secretory ca... 30 3.8
AE014298-2146|AAF48452.1| 343|Drosophila melanogaster CG9195-PA... 30 3.8
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 30 3.8
AF224720-1|AAF35367.1| 343|Drosophila melanogaster secretory ca... 29 5.0
AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-P... 29 8.8
>AY119444-1|AAM50098.1| 1133|Drosophila melanogaster AT03104p
protein.
Length = 1133
Score = 58.0 bits (134), Expect = 1e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 191 MTNASKPVPMKLFAAWEVDRTPSNCIPR 274
MT KPVPMKLFAAWEVDRTP NCIPR
Sbjct: 65 MTTGQKPVPMKLFAAWEVDRTPPNCIPR 92
>AE014297-3436|AAN13968.1| 1175|Drosophila melanogaster CG5405-PB,
isoform B protein.
Length = 1175
Score = 58.0 bits (134), Expect = 1e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 191 MTNASKPVPMKLFAAWEVDRTPSNCIPR 274
MT KPVPMKLFAAWEVDRTP NCIPR
Sbjct: 65 MTTGQKPVPMKLFAAWEVDRTPPNCIPR 92
>AE014297-3435|AAF56220.3| 1175|Drosophila melanogaster CG5405-PA,
isoform A protein.
Length = 1175
Score = 58.0 bits (134), Expect = 1e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 191 MTNASKPVPMKLFAAWEVDRTPSNCIPR 274
MT KPVPMKLFAAWEVDRTP NCIPR
Sbjct: 65 MTTGQKPVPMKLFAAWEVDRTPPNCIPR 92
>AE014297-3434|AAN13970.2| 1133|Drosophila melanogaster CG5405-PC,
isoform C protein.
Length = 1133
Score = 58.0 bits (134), Expect = 1e-08
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2
Query: 191 MTNASKPVPMKLFAAWEVDRTPSNCIPR 274
MT KPVPMKLFAAWEVDRTP NCIPR
Sbjct: 65 MTTGQKPVPMKLFAAWEVDRTPPNCIPR 92
>AY075562-1|AAL68369.1| 343|Drosophila melanogaster RH68403p
protein.
Length = 343
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 364 LVKNSMHEYCFYTTTYLRICIGKLILYAHT*QV*DNVITIYETML 498
LVK + + FYT T L IG LIL H + + I+ TML
Sbjct: 155 LVKRLYYIWIFYTMTLLANVIGGLILLFHAGEFETFFLAIFYTML 199
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 301 IAVFLFLVW-VHASQQFPRETILVKNSMHEYCF 396
+ V ++W VH QQ P +L+ +S+ E CF
Sbjct: 3444 VKVIASILWKVHTQQQLPELPLLISSSLFETCF 3476
>AF241834-1|AAF64492.1| 343|Drosophila melanogaster secretory
carrier membrane protein protein.
Length = 343
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 364 LVKNSMHEYCFYTTTYLRICIGKLILYAHT*QV*DNVITIYETML 498
LVK + + FYT T L IG LIL H + + I+ TML
Sbjct: 155 LVKRLYYIWIFYTMTLLANVIGGLILLFHAGEFETFFLAIFYTML 199
>AE014298-2146|AAF48452.1| 343|Drosophila melanogaster CG9195-PA,
isoform A protein.
Length = 343
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 364 LVKNSMHEYCFYTTTYLRICIGKLILYAHT*QV*DNVITIYETML 498
LVK + + FYT T L IG LIL H + + I+ TML
Sbjct: 155 LVKRLYYIWIFYTMTLLANVIGGLILLFHAGEFETFFLAIFYTML 199
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 301 IAVFLFLVW-VHASQQFPRETILVKNSMHEYCF 396
+ V ++W VH QQ P +L+ +S+ E CF
Sbjct: 3444 VKVIASILWKVHTQQQLPELPLLISSSLFETCF 3476
>AF224720-1|AAF35367.1| 343|Drosophila melanogaster secretory
carrier membrane protein protein.
Length = 343
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 364 LVKNSMHEYCFYTTTYLRICIGKLILYAHT*QV*DNVITIYETML 498
LVK + + FYT T L IG LI + H + + I+ TML
Sbjct: 155 LVKRLYYIWIFYTMTLLANVIGGLIFWFHAGEFETFFLAIFYTML 199
>AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-PA
protein.
Length = 527
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 389 YSCIEFFTRIVSLGNCWEA*THTKNKKTAISSIFSKQLTLECNWKGFCLL 240
YS + +T +V N +E N + + +K + CNW G+CLL
Sbjct: 243 YSKVTGYTTLVVRQNGYEGVITVMNGRMKDLKLPTKVDGIICNWMGYCLL 292
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,519,302
Number of Sequences: 53049
Number of extensions: 683499
Number of successful extensions: 1191
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -