Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0834
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82073-3|CAB04926.1|  631|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U64851-2|AAC47987.1|  613|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U21317-12|AAN60539.1|  697|Caenorhabditis elegans Hypothetical p...    30   2.0  
U21317-11|AAN60538.3|  509|Caenorhabditis elegans Hypothetical p...    30   2.0  
U21317-10|AAA62529.1|  753|Caenorhabditis elegans Hypothetical p...    30   2.0  
U41746-7|AAK71873.1|  803|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81592-3|CAB04729.2|  389|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z82073-3|CAB04926.1|  631|Caenorhabditis elegans Hypothetical
           protein W06D12.5 protein.
          Length = 631

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/73 (28%), Positives = 30/73 (41%)
 Frame = -1

Query: 291 ILQATYLGMQLEGVLSTSQAAKSFMGTGFDALVIFSDLFFSVIVTALHTFSQHNTTAGQN 112
           +L A+YLG     +    + +    GTG D  + F   F S+    L     +N T G N
Sbjct: 407 LLLASYLGACTIFIYFYDELSGPEPGTGMDMFLCFYFSFISLSTIGLGDIMPNNATVGNN 466

Query: 111 GHTYILTKNSIKF 73
            + Y      IKF
Sbjct: 467 RNIY--ENEKIKF 477


>U64851-2|AAC47987.1|  613|Caenorhabditis elegans Hypothetical
           protein F28A12.1 protein.
          Length = 613

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -2

Query: 395 KQYSCIEFFTR-IVSLGNCWE 336
           KQ++C ++ T+ I SLG CWE
Sbjct: 198 KQFNCCKYMTQSITSLGRCWE 218


>U21317-12|AAN60539.1|  697|Caenorhabditis elegans Hypothetical
           protein B0495.10c protein.
          Length = 697

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 GKLLGEYT*NRCFFIFGVGSRLP 341
           G ++ +YT NR F  FG+G+++P
Sbjct: 431 GSIIRDYTPNRLFAAFGIGAKIP 453


>U21317-11|AAN60538.3|  509|Caenorhabditis elegans Hypothetical
           protein B0495.10b protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 GKLLGEYT*NRCFFIFGVGSRLP 341
           G ++ +YT NR F  FG+G+++P
Sbjct: 193 GSIIRDYTPNRLFAAFGIGAKIP 215


>U21317-10|AAA62529.1|  753|Caenorhabditis elegans Hypothetical
           protein B0495.10a protein.
          Length = 753

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 GKLLGEYT*NRCFFIFGVGSRLP 341
           G ++ +YT NR F  FG+G+++P
Sbjct: 431 GSIIRDYTPNRLFAAFGIGAKIP 453


>U41746-7|AAK71873.1|  803|Caenorhabditis elegans Hypothetical
           protein T18H9.7a protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 203 SKPVPMKLFAAWEVDRTPSNCIPR 274
           S  + M+L+A W+VDR   + +PR
Sbjct: 7   SSSMAMRLYATWDVDRATPSTVPR 30


>Z81592-3|CAB04729.2|  389|Caenorhabditis elegans Hypothetical
           protein T16G1.3 protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 160 NSTAHVFTAQHNRRSEWTYLYINKK*HQIHSYLSSVMPMQRTTILVN 20
           N T   F  ++   +   +LYIN K +++HS L S+   Q  ++ +N
Sbjct: 117 NLTKGFFAMEYVDNAITRHLYINLKSYELHSILKSLAVFQAESLKLN 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,182,172
Number of Sequences: 27780
Number of extensions: 372889
Number of successful extensions: 773
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)